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SCNpilot_cont_500_bf_scaffold_3923_12

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 16500..17927

Top 3 Functional Annotations

Value Algorithm Source
Na-driven multidrug efflux pump n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTA9_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 446.0
  • Bit_score: 757
  • Evalue 8.40e-216
  • rbh
Multidrug transporter MatE {ECO:0000313|EMBL:AHY57511.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 454.0
  • Bit_score: 758
  • Evalue 4.10e-216
Na-driven multidrug efflux pump; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 446.0
  • Bit_score: 757
  • Evalue 2.70e-216
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGCGCTGCTTCCGCGACCCGGCAACAGCGCGTCCCGCGCCGGCCGCAGTCCGCGTCATTCCCCGCATGTCCATCACCGCCACGCCGCGCTTCCGCCAGGAAGTGCGCGCCACCGGGTTGCTCGCCCTGCCGCTTGTACTGGGCCATGTTTCGACTGGCCTGATCGCCTTCGTCGACAACACCATCGCCGGCCACCACGGTACCGATACGTTCGCCGCTGTCAGCATCGGCACCGCGCTGCTGTGGCTGCCGATGCTGGTGCCGATCGGCACCCTGATCTCGCTGACCGCCTCGGTGTCGCAGCTGCACGGCGCCGGCCGCGAGCGCGACATCGGCCCGCTGTTCCGCCAGGCGCTGTGGCTGGGCGTGGGCCTGAGCGCGCTGATGTTCGCTTTCCTCAGCGTGGTGCCGGCGTTCCTGCCGGCCTTCGGCATCGCCCCGGAGATCGTGCCCGGGGCCACCGGCTTCCTGCATGCGATCCGCTGGGGCGTGCCGGCGCTGACGCTGTATTTCTGCATGCGCTACCTGAGCGAGGGCATGCACTGGACGTTGCCGACCATGCTGCTCGGGTTCGGCGGGCTGCTGGTGCTGGGGCCGCTGGGCTATGCGCTGTGCAATGGCCGCTTCGGCTTTCCCGAAATGGGCGCCGAAGGCCTGGGCATCGCCTCGTCGGTGACGATGTGGCTGCAGGCGCTGTGCTTCGCCGGCTACCTGTGGAAGACCCGGCGTTTCGCCCACCTGCAGCTGTTCGGGCATTTCGAGCCGCCGCGCTGGCGCGCGATCTGGGACCTGCTGCGTACCGGCCTGCCGATCGGCATCACCGTGCTCATGGAAGGCGGTCTGTTCATCATCACCGCGCTGCTGATCGGCCGTATCGGCGCGGTCGAGGCCAGCGCCCACCAGATCGCCATCAACGTCGCCCAGCTGTGTTTCATGATCCCGATGGGCGTGGCCGAGGCCACCACCGTGCGCGTGGGCCATGCGGTGGGCAGCAACGATCCGCTGGGCGTGCGCCGCGCCACCTGGGCCGGTTACGCGATCGTGCTGGTCACGCAGATGCTGTCGATCACCGTGCTGCTGCTGGGCCACGACGCGGTGGTGCGCCTGTACACCGATGACCTGGCGGTGGCCGCGCTGGCCTCCACCCTGCTGCTGTACGCGGCGACCTTCCAGTTCCCCGATGGCATCCAGGTGCTGTCGGCCGGCGCGCTGCGCGGGCTCAAGGACACGCGCGTGCCGATGTTCATCGCCATGTTCGCGTACTGGGGGGTGGGCATGCCGCTCGGCGCCGGCCTCGGCCTGGGCCTGGGCTGGGGGCCGCAGGGCATGTGGGTCGGCCTGATCATGGGCCTGACCGCGGCCGCCGTGCTGATGGGCTGGCGCCTGCGGATCAGCAGCCAGCGCCTGTTCCTCCAGCCGGCACCCTGA
PROTEIN sequence
Length: 476
MRCFRDPATARPAPAAVRVIPRMSITATPRFRQEVRATGLLALPLVLGHVSTGLIAFVDNTIAGHHGTDTFAAVSIGTALLWLPMLVPIGTLISLTASVSQLHGAGRERDIGPLFRQALWLGVGLSALMFAFLSVVPAFLPAFGIAPEIVPGATGFLHAIRWGVPALTLYFCMRYLSEGMHWTLPTMLLGFGGLLVLGPLGYALCNGRFGFPEMGAEGLGIASSVTMWLQALCFAGYLWKTRRFAHLQLFGHFEPPRWRAIWDLLRTGLPIGITVLMEGGLFIITALLIGRIGAVEASAHQIAINVAQLCFMIPMGVAEATTVRVGHAVGSNDPLGVRRATWAGYAIVLVTQMLSITVLLLGHDAVVRLYTDDLAVAALASTLLLYAATFQFPDGIQVLSAGALRGLKDTRVPMFIAMFAYWGVGMPLGAGLGLGLGWGPQGMWVGLIMGLTAAAVLMGWRLRISSQRLFLQPAP*