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SCNpilot_cont_500_bf_scaffold_3827_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3..680

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=216778 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 226.0
  • Bit_score: 386
  • Evalue 2.60e-104
30S ribosomal protein S12 methylthiotransferase RimO; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 225.0
  • Bit_score: 375
  • Evalue 1.30e-101
ribosomal protein S12 methylthiotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F76378 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 227.0
  • Bit_score: 383
  • Evalue 1.60e-103

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
TGGACCCGCCTGCACTACGTCTACCCGTATCCGCACGTGGACGACATCGTGCCGCTGATGGCCGACGGCAGGGTCCTGCCGTACCTGGACATCCCGTTCCAGCACGCCAGCCCGCGCATCCTCAAGCTGATGAAGCGCCCTGGCGCGGTCGACAAGACCCTGGAGCGGGTGCTGCGCTGGCGCGAAACCTGCCCGGACATGACCGTGCGCTCAACCTTCATCGTCGGCTTCCCGGGCGAGACCGAGGCCGAGTTCGAGCAGCTGCTCGAGTTCCTCGATGCCGCCCAGCTCGACCGCGTCGGCGCCTTCGCCTACTCGCCGGTGGAAGGGGCGACCGCCAACCAGCTGCCGGACCCGGTGCCTGAAGCAGTGAAGCAGGAGCGTCTGGCCCGTTTCATGGAAAAGCAGGCGGCCATTTCCGCGGCCAGGCTCGAGGCCAAGGTCGGCAGCGTGCAGCAATGCCTGGTGGACGCCATCGAGGACGGCATCGCGGTGGCGCGCTCCAAGGCCGATGCGCCGGAGATCGACGGCCTGGTGCATATCCAGAATGCCGACGCGGCGGGGCTGCGCGTGGGCGATTTCGTCGACGTGGACATCACCGACAGCGATGAGCACGACCTGTTCGGCGACGCGCGCGTCAGGCCGGCCGCCACGCCGTTCGACCTCAAGGTGCTGTGA
PROTEIN sequence
Length: 226
WTRLHYVYPYPHVDDIVPLMADGRVLPYLDIPFQHASPRILKLMKRPGAVDKTLERVLRWRETCPDMTVRSTFIVGFPGETEAEFEQLLEFLDAAQLDRVGAFAYSPVEGATANQLPDPVPEAVKQERLARFMEKQAAISAARLEAKVGSVQQCLVDAIEDGIAVARSKADAPEIDGLVHIQNADAAGLRVGDFVDVDITDSDEHDLFGDARVRPAATPFDLKVL*