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SCNpilot_cont_500_bf_scaffold_3827_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1695..2201)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003075E60 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 165.0
  • Bit_score: 290
  • Evalue 7.90e-76
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 168.0
  • Bit_score: 285
  • Evalue 3.60e-74
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 166.0
  • Bit_score: 282
  • Evalue 1.20e-73

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAGCCGCTGGCGCCCCCCTGCAGAAAAAAGTACCGCCCTGATCACCGCCCGGGGCCATGCGCGGCTGAAGGCCGAACTGGACGAGCTGTGGCGCCAGCGCCGGCCCGAAGTGGTCAAGGCGCTGGCCGCCGCCGCGGCCGAAGGCGACCGCTCGGAGAACGCCGAGTACACCTACCGCAAGAAGCAGCTCGGCGAGATCGACCGCCGCGTGCGCTACCTGAGCAAGCGCCTGGAAGCGCTGCGCGTGGTGGATACCCGCCCCAGCGACCCGCAGGCGGTGTTCTTCGGCGCCACGGTGGAACTGGAGAACGTCCAGTCCGGCCAGGTCCACGTGTACCGCATCGTCGGCCCGGATGAAACCGATGCGACCGCTGGCTGGATCAGCATCGATTCGCCGCTGGCCCGCGCGCTGCTGAAAAAGCGCATCGACGACGAATTCGAGGTGGAACTGCCCGGCGGACGGCAGGGGTTCGCCATCATCGGCATCGACTACGACGCCGGGTGA
PROTEIN sequence
Length: 169
MSRWRPPAEKSTALITARGHARLKAELDELWRQRRPEVVKALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLSKRLEALRVVDTRPSDPQAVFFGATVELENVQSGQVHVYRIVGPDETDATAGWISIDSPLARALLKKRIDDEFEVELPGGRQGFAIIGIDYDAG*