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SCNpilot_cont_500_bf_scaffold_5016_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 7503..7661

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein F n=2 Tax=Xanthomonas RepID=UPI00036D32F7 similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 53.0
  • Bit_score: 89
  • Evalue 1.40e-15
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 53.0
  • Bit_score: 87
  • Evalue 1.70e-15
Type IV pilus assembly protein PilC {ECO:0000313|EMBL:ETC87154.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 53.0
  • Bit_score: 87
  • Evalue 4.50e-15

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Taxonomy

Xanthomonas hortorum → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 159
ATGTCCGCTACCCGCAGCGCAGTGAACAAACCGCCCGTGGATCGCAGCACCAGCCTGATGCAGCCGTTTGTCTGGGAGGGGACCGACAAACGCGGCGTGAAGATGAAGGGCGAACAGGAAGCCCGCAATGCCAACCTGCTGCGTGCCGAGCTGCGCAAG
PROTEIN sequence
Length: 53
MSATRSAVNKPPVDRSTSLMQPFVWEGTDKRGVKMKGEQEARNANLLRAELRK