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SCNpilot_cont_500_bf_scaffold_5036_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(3..614)

Top 3 Functional Annotations

Value Algorithm Source
exodeoxyribonuclease V subunit alpha; K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 205.0
  • Bit_score: 223
  • Evalue 5.90e-56
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 205.0
  • Bit_score: 223
  • Evalue 2.60e-55
Exodeoxyribonuclease V alpha chain n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTI7_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 205.0
  • Bit_score: 223
  • Evalue 1.90e-55

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Taxonomy

Pseudoxanthomonas spadix → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAGCCTGTTGGCCGCACTTAGCAAGGCCGGCGTGCTGCGCGCGCTCGACCACGCGTTGGCGCAGAGCCTGCGCCGGCTCGATCCGGACACCCCCGATGCGGTGCTGGCCGCCGCCGCGCTGGCCTCGCTGGCCGTCGCCCACGGCCATGCCGGGTTCGATCCGGCGCGACCGGCGCGGCTGCTCGAGGGGCCGTTGCCCTGGCCCGACGCGCAGGCGTGGATCGCCCAGCTGCAGGCCTCGCGCTGGGTGGCGCAGCCGCATGACGATGCGGCCGAGGCCGCGCAGGCGCCGCTGGCCTGGGAACACGGGCTGCTGTACCTGCGCCGTGACCGCGAGTACGAACGGCGGCTGGCGCTGGGCCTGCAGCGCATCGGCCAGGCACCGCTGGAGCGGGCCGATCCGGCGGCATTGGCGCCGCTGTTCGCGCAGCTGTTTCCGGGCACCGTGGATGCCGCGGCAGGCGTGGCGTCGGCACAGGGCGATCTGTTCGCGCAGTCGGCCGTGGCCGATGCGCCCGCCGCTGGCGACCAGCAGGCGCGCGCTGCCGCGCTGGCGCTGCGCCACGCCCTGCTGCTGGTCACCGGCGGGCCCGGCACCGGCAAGACCACC
PROTEIN sequence
Length: 204
MSLLAALSKAGVLRALDHALAQSLRRLDPDTPDAVLAAAALASLAVAHGHAGFDPARPARLLEGPLPWPDAQAWIAQLQASRWVAQPHDDAAEAAQAPLAWEHGLLYLRRDREYERRLALGLQRIGQAPLERADPAALAPLFAQLFPGTVDAAAGVASAQGDLFAQSAVADAPAAGDQQARAAALALRHALLLVTGGPGTGKTT