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SCNpilot_cont_500_bf_scaffold_5036_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(4234..7590)

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 999.99
  • Bit_score: 1579
  • Evalue 0.0
exodeoxyribonuclease V subunit gamma (EC:3.1.11.5); K03583 exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 999.99
  • Bit_score: 1565
  • Evalue 0.0
  • rbh
exodeoxyribonuclease V subunit gamma n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304D3B5 similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 999.99
  • Bit_score: 1596
  • Evalue 0.0
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3357
ATGCCCGACGCCTCCGCGGACTTCCGCCTCTACCACTCCAACGCCCTGGACGTGCTTGCCTCGCTGCTGGCCCATGCGCTGCGCGAGCCCGATCCCGGCCGGCCGCTGCTGGCGGCCGACACGGTGCTGATCCCGCAGGTGGCGATGCGCCGCTGGCTGCAGTCCACGCTGGCCGCCGAGTACGGCATCGCCGCCAACCTCGAGTTCCTCACGCCCGGCGAGTTCGTCGCCCGCGCGCTGAAGGAAAACGTGCCCGGCGAGCAGGACGACCTCGGCGCGGCCGGGCTGCACTGGCGGCTGTACGCGGCGCTGACCGACGCGGCGCTGATGCGGCAGCCGGCAATGGCCGCGCTGCGCGCCTACCTGGCCGGCAATGCGCCCGGCGGCGACGATCCGTTGCGGGCGTGGTCGCTGGCCGCCGAACTGGGCGGGGTGTTCGAGAAGTACCAGGCCTGGCGTCGCGACTGGCTGCTGCGCTGGGAGGCCGGCGCCGACGCCGCCGACCCGCAGGCCATCCTGTGGCGCCACATCGCCGGTGGCCAGCAGCACCGCGCGCGCCGCATCAACGACTACCTGGCGCGGTTCGAGGGCGCTGGCCAGCCGCTGCCGCGCGGCCTGCCGTCGCGGCTGTTCGCCTTCGCCACGCTCAACGTCTCGCCCGACGTACTGCGGGTGATCGCCACCCAGGCGCGGGTCGGCACGCTGCACTTCTACCTGCCCACGCCGACGCGTGCCTACTGGGGCGACCTGCAGACCCTGGCCGAGCGGCTGCGCGGCGGCATCGACGACCCGTTCGGCAGCGCCGCCGGCGAGAACCCGCTGCTGCAGGCCTGGGGCGCGGCCGGGCGCGATTTCATGGCGGTGCTGGGCAGTTACGAGGTGGTGCACCCGTCCGGCGAAATCGCCGCTTATGCCGATCCGGAGCGCCGCGAGGGGCCGATGCTGGACCAGGGCGGCCTGCGCGACAGCCTGCTGCACCGGCTGCAGGCCGACCTGTTCCACCGCCGCGCGCGGCCGCCGGCGCCACTGCGCCCGGCATTGCGGGTGGACGACCCCAGCGTGCAGGTCCACGCCTGCCATACCCGCCTGCGCGAAATGCAGGTGCTGCACGACCAGCTGCGCGCGCTGCTGGACGATCCGCGCTTCGACCCGCCGCTGCAGCCGCGCGAGATCGCGGTGCTGGCGCCGGACATCGACCCCTACGTGCCGTACCTGGAATCGGTGTTCGGCGGCCGCGGTGGCGGCGAGGGCCATATCCCGTGGGCGCTGGCCGATGCCAGTCCGCTGCAGGGCGAGCCGCTGGCCGAGGTGTTCGTGCAGCTGCTGGGGCTGCCGGTCTCGCGCTTCGGCCTCAACGAGATCCTCGACCTGCTCGCCAGCCCGCCGCTGGCCGCCGCCGCCGGACTGGATGCGGCCGCGTTCGAGCGCCTGCATGGCTGGCTGCAGGCCGCCGGCGCGCGCTGGGGGCTGGATGCGGCGCATCGCGGCCAGCACCAGGCGCCGGCCGACGACGCCTGCACCTGGCAGTTCGCGCTGGACCGGCTGCTGCTCGGCCACGCCAGCGGCAGCGATGACGACCTGGCCGGGGTCGCGCCGTGGCCGGAGCTGGAGGGCAGCGCACTGGCCGCGCTCGATGCGCTGATCCGCCTGCTGCGGGTGCTCGCCCGCCACCAGAAGACGCTGGCCGAGGCGCTGCCTCCGGCGCAGTGGCGCGAGCGCCTGCTCGGGCTGCTGGCCGCGCTGCTGCCGGACGCCCCGGCCGAGCCGTCCACCCAGCGCGCGCTCGAACGCCTGCGCAAGCTGGTGGACGAGTTCGCCGGGGAAGCCGCCCGCGCCGGCTTCGAGGCCCCGGTGCCGGCCGAAGTGGTGCGCGCGCATTTTTCCGCGGTGCTGTCCGAGGCCGACACCCGCGCGCCGCTGCTCACCGGCGGCGTCAGCTTCGGCCGCATGGTGCCGATGCGGCTGCTGCCGTTCCGCGCGATCTGCGTGCTGGGCCTGAACGGCGGCGATTTCCCGCGCCGCGACCCGGCCGCGGGCCTGAGCCGGCTCACCGCCGAACTCGGCACCGCGCGTCGCCGTCATGGCGACCGCTCGCTGCGCGAGGACGACCGTTTCCTGTTCCTGCAGCTGCTGGCCTCGGCGCAGGACGTGTTCTACCTGAGCTACCTCGGTGCCGACGCGCGCGACGGCAGCGTGCGCGAGCCCTCGGTGCTGGTCAGCGAGCTGATCGATGCGGTGGCCGCCTGCCACGCCGATCCGGCGGCCGCGCGCCACGCCATGGTCGTGCGCCATCCGCTGCAACCCTTCGCCCCGGCCGCGTTCGGTGGCGACGGCGAGCCACGGCGTTTCAGCTATCGCCGCCAGTGGCACCCGGCCGCCGGCGCGGTCGGTGGCCAGCGCCGGCAGCTGGCGCCGTGGTCGGCCGGCGTGCTGGATGCGCCGCTGCCCGCTGCCCTGCGCGAGCCCGGCGTGTCGCTGGATGCGCTGCGCCGTTTCCTGGCCGATCCGGCCGGGCAGTTCCTCGAACAGCGCCTGGGCCTGCGCCTGGGGGGCGAGATCGAGGCCAGCGACGATGTCGAACCGCTGGTGCTGCCCGAACGCGGGCGCGAGCACGGCACGCTGCAGCAGCAGGTGCTCGCCGCGCTGCTGGAGGGCCGCGAGCAGGGGCTGTACGCACGCCTGCGCGCGCGCGCGCTGCTGCCGTCCGGAGCGCTCGGCCGGCAACAGTTCGAACAGCTGCTGGGCCGCATCCGCCCGTGCGCGGACAGCTTCGCGCAGTGGTACGACGGCACGCCGCTGCAGTCGCAGCGGCTGGAAGTGGCGATCGACGACTGCATCGTTCACGGTCGTATCGCACAGATCCATCCACAGGGACTGCCACGCCTGCAGGCCGGTGCGCCGGGCGTGGCCTGGGTGCTGCGCAGCGGCCTGGACTGGCTGCTGGCCAATGCCGCCGGCGTGCCACTGCCCCTGCTGCAGTTCATTGATGCCGGCGATGGCGGTTTCGGTCCGCACGTCCTGCCGCCGCCATCCGCTGAACAGGCCAGGTCGGCCCTCAAAGCCTTGCTGCAGTTGCGCTGGCAGGGGCTGCAGGCGCCACTGCCGTTTGCCCCGTACACCGGCTGGGCGATCTACAACGCCGATCCGGACGCACGCGAAAAGACCGCGCGCGAGAAGTGGCATGGCAGCGAGCGCAGCTGGGGCGAGCGCAATGGCGAAGCCCTGCAGCTGGCGCTGCGCGGCGCCGATCCGTTCGCCGATCCAGCCACTACCAACAGATTTATCCACAACAGCCTGCTGGTGTTCACCGCACTGCGCGAGGCCCGGGTGCCGGCCGGCAGCGAGGACCGCGCATGA
PROTEIN sequence
Length: 1119
MPDASADFRLYHSNALDVLASLLAHALREPDPGRPLLAADTVLIPQVAMRRWLQSTLAAEYGIAANLEFLTPGEFVARALKENVPGEQDDLGAAGLHWRLYAALTDAALMRQPAMAALRAYLAGNAPGGDDPLRAWSLAAELGGVFEKYQAWRRDWLLRWEAGADAADPQAILWRHIAGGQQHRARRINDYLARFEGAGQPLPRGLPSRLFAFATLNVSPDVLRVIATQARVGTLHFYLPTPTRAYWGDLQTLAERLRGGIDDPFGSAAGENPLLQAWGAAGRDFMAVLGSYEVVHPSGEIAAYADPERREGPMLDQGGLRDSLLHRLQADLFHRRARPPAPLRPALRVDDPSVQVHACHTRLREMQVLHDQLRALLDDPRFDPPLQPREIAVLAPDIDPYVPYLESVFGGRGGGEGHIPWALADASPLQGEPLAEVFVQLLGLPVSRFGLNEILDLLASPPLAAAAGLDAAAFERLHGWLQAAGARWGLDAAHRGQHQAPADDACTWQFALDRLLLGHASGSDDDLAGVAPWPELEGSALAALDALIRLLRVLARHQKTLAEALPPAQWRERLLGLLAALLPDAPAEPSTQRALERLRKLVDEFAGEAARAGFEAPVPAEVVRAHFSAVLSEADTRAPLLTGGVSFGRMVPMRLLPFRAICVLGLNGGDFPRRDPAAGLSRLTAELGTARRRHGDRSLREDDRFLFLQLLASAQDVFYLSYLGADARDGSVREPSVLVSELIDAVAACHADPAAARHAMVVRHPLQPFAPAAFGGDGEPRRFSYRRQWHPAAGAVGGQRRQLAPWSAGVLDAPLPAALREPGVSLDALRRFLADPAGQFLEQRLGLRLGGEIEASDDVEPLVLPERGREHGTLQQQVLAALLEGREQGLYARLRARALLPSGALGRQQFEQLLGRIRPCADSFAQWYDGTPLQSQRLEVAIDDCIVHGRIAQIHPQGLPRLQAGAPGVAWVLRSGLDWLLANAAGVPLPLLQFIDAGDGGFGPHVLPPPSAEQARSALKALLQLRWQGLQAPLPFAPYTGWAIYNADPDAREKTAREKWHGSERSWGERNGEALQLALRGADPFADPATTNRFIHNSLLVFTALREARVPAGSEDRA*