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SCNpilot_cont_500_bf_scaffold_6533_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1312..2559)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000310E21A similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 418.0
  • Bit_score: 519
  • Evalue 2.60e-144
  • rbh
Membrane protein {ECO:0000313|EMBL:AHY57392.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 415.0
  • Bit_score: 506
  • Evalue 4.20e-140
mtrC; membrane fusion protein precursor similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 416.0
  • Bit_score: 500
  • Evalue 5.10e-139

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGTCGCGTTTCTGGAAGATCGTGCTGCTCGTCATCGCCGTCCTGCTGGTGGCGGGAATCGGCTACCGGATGATGGGAGGCGGCAAGCAGGCCGGGGACCCGGCACAGGCGGCGGGCGGCGGCCGGGGCGGCGGCGACAGGGCGCGCGACCCGGTGCCGGTCACCGTGGTGGCGGCCGAGCGCAGGAACGTGCCGGTGTATGTCACCGCGCAGGGCACGGTGGCCGCCTACAACACGGTCACGGTCAGCCCGCAGGTCGGCGGCGAGCTGCTCAGCGTCGACTTCAAGGAAGGCCAGGCGGTGAAGAAGGGCGACCTGCTGGCCCGGATCGACCCGCGCACCTTCCAGGCCCAGTACGACCAGGCCCTCGCCAGCCAGCGCCAGAACCAGGCCCTGCTGGCCACCGCCCAGTCCAACTACGAGCGTTCCAATTCCGAGGCCTACCGCCAGTACGTGGCGCAGACCGACCTGACCACCCTGCGCAACCAGGTGGCCCAGTACCAGGCGGCCGTGGCCGCCGCCCAGGCCACGGCCAACCAGAGCAGGGTGCAGCTGGGCTACACCCGCATCGTCTCGCCCATCGACGGCGTGGCCGGCATCCGCGCGGTCGATCCCGGCAACGTCGTCAGCGCCGGCACGGCGATCGTCACCCTCACCCAGCTGCAGCCGATCCACGTGCTGTTCAACCTGCCCGAACAGCAGTTGGACGCGGTGCGCGCGGCGCAGGCCAAGGGGCCACTGGAAGCGGCGACGCTGGACCGCGCCGGCGGCAGCGTGGTCAACGCCGACGGCAAGCTGCAGGTGGTGGACAACCAGATCAGCGCCACCAGCGGCACCTTCCGCCTGCGCGCCGAGTTCCCCAACGCCGACCAGGCGCTGTGGCCGGGCCAGTTCGTCAACGTGCGCATGAAGCTCGACGAGCTGCCCGGCGCGGTAGTGGTGCCGGCCGAGGCCGTGCAGCGCAGCAGCACCGGCGATTTCGTCTACCTGGTCAAGCCGGACGACGCCGTCACCCTGCGCGACGTGGTGCAGGGCGGCCAGGTCGACGACAGCCATGTGGTCATCAGCAAGGGCCTGCAGCCGGGCGACAAGGTGGTCACCGAAGGCCAGTTCCGGCTCAAGGAAGGCGTCAAGGTCATTCCGCTGCAGCCGGGCCAGGCACCGCCGGAGCCGACCGAGGCGCAGTTGAAGGCCGCCAGCGAGAAGCGCGGCGGCGGCGGCGGCCGGGGCGGTCGTGGCCCGCGCTGA
PROTEIN sequence
Length: 416
MSRFWKIVLLVIAVLLVAGIGYRMMGGGKQAGDPAQAAGGGRGGGDRARDPVPVTVVAAERRNVPVYVTAQGTVAAYNTVTVSPQVGGELLSVDFKEGQAVKKGDLLARIDPRTFQAQYDQALASQRQNQALLATAQSNYERSNSEAYRQYVAQTDLTTLRNQVAQYQAAVAAAQATANQSRVQLGYTRIVSPIDGVAGIRAVDPGNVVSAGTAIVTLTQLQPIHVLFNLPEQQLDAVRAAQAKGPLEAATLDRAGGSVVNADGKLQVVDNQISATSGTFRLRAEFPNADQALWPGQFVNVRMKLDELPGAVVVPAEAVQRSSTGDFVYLVKPDDAVTLRDVVQGGQVDDSHVVISKGLQPGDKVVTEGQFRLKEGVKVIPLQPGQAPPEPTEAQLKAASEKRGGGGGRGGRGPR*