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SCNpilot_cont_500_bf_scaffold_7686_6

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(4881..5411)

Top 3 Functional Annotations

Value Algorithm Source
fimbrial protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000378EA57 similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 170.0
  • Bit_score: 237
  • Evalue 1.10e-59
Fimbrial protein {ECO:0000313|EMBL:AJC44855.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 170.0
  • Bit_score: 237
  • Evalue 1.50e-59
type IV pilus assembly protein PilF; K02656 type IV pilus assembly protein PilF similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 177.0
  • Bit_score: 230
  • Evalue 4.20e-58

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
TACACCCTGCAGGCGGTGATCGAAGGGCGGCGTGGCCACGTGGAGGCCGCCGGCAAGCTGTACCGGCGCGCCGCCGAGCTTGCGCCGGCCCAGGGCGACGTGCTCAACAACTATGGCGCCTGGCTGTGCGCCAACGGGCATCCGGCCGAAGCGCTGGTCTGGTTCGGCCGCGCCGTGGCCGATCCCCGCTACCAGCAGCGTGCCGACGCGCTGGCAAATGCCGGCGGCTGCGCACTGGAGGCAGGGCAGGGCGAACGCGCCGGGCAGGACCTGCGGCAGGCGCTCGAGCTTGACCCGGACAATGCCTACGCGCTGGAGGCGATGGCGCGCAACGAGGTCCGGCTGGGGCGGTATTTCGAGGCGCGGGCCTTCTACCAGCGGCGGCTGGCGGCTGCGCCAGCAACGGTTTCCGTGTTACAACTTGCCATTCAGATAGAAGAACGGCTGGGCGACAGCAGTGCCGTCAGCCGATACCAGCAGCGGTTGCGTGAGGAATTTCCTGCCGGCGCAACCCCGAATTCCCAGGGCTGA
PROTEIN sequence
Length: 177
YTLQAVIEGRRGHVEAAGKLYRRAAELAPAQGDVLNNYGAWLCANGHPAEALVWFGRAVADPRYQQRADALANAGGCALEAGQGERAGQDLRQALELDPDNAYALEAMARNEVRLGRYFEARAFYQRRLAAAPATVSVLQLAIQIEERLGDSSAVSRYQQRLREEFPAGATPNSQG*