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SCNpilot_cont_500_bf_scaffold_11933_5

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2869..3345)

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-3 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035EDDA7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 158.0
  • Bit_score: 304
  • Evalue 6.50e-80
  • rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 158.0
  • Bit_score: 304
  • Evalue 7.00e-80
infC; Translation initiation factor 3; K02520 translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 158.0
  • Bit_score: 300
  • Evalue 2.30e-79
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGCCGCGCGTGCGCGTGATCGGCAGCGACGGTGAAATGATCGGCGTGTTGACGCGCGACGAAGCGCTGTCGATGGCCGAGGATGAGGGCCTGGACCTGGTCGAGATCCAGCCGCAGGCCGATCCGCCGGTCTGCAAGATCATGGACTTCGGCAAGTTCAAGTTCGAACAGCAGAAGAAGGCCAACGAGGCCAAGAAGAAGAGCCGTCAGGTCGAGATCAAGGAAGTCAAGTTCCGTCCGGTCACGGACGAGGGCGACTACCAGATCAAGCTGCGCAAGATGCGTGGTTTCCTCGAAGAGGGTGACAAGGTCAAGGTCAACATCCGCTTCCGTGGCCGTGAGATGAGCCACCAGGAGCTGGGTCGCGAGATGGCCGGTCGCATCGAGGCGGACCTGGGCGAGGACATCGTGATCGAATCGCGCCCGCGCCTGGAAGGCCGGCAGATGGTCATGATGATCGCACCGAAGAAGAAGTAA
PROTEIN sequence
Length: 159
VPRVRVIGSDGEMIGVLTRDEALSMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKSRQVEIKEVKFRPVTDEGDYQIKLRKMRGFLEEGDKVKVNIRFRGREMSHQELGREMAGRIEADLGEDIVIESRPRLEGRQMVMMIAPKKK*