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SCNpilot_cont_500_bf_scaffold_12936_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3..278

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 3.70e-41
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 90.0
  • Bit_score: 173
  • Evalue 4.10e-41
lysyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5CEA5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 2.60e-41

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
GAACTGTTCATCAACGGCAAGGACATCGCCAACGGCTTCTCCGAGCTGAACGACCCCGAGGACCAGGCCGCGCGCTTCCAGGCGCAGGTGGAGGCCAAGCAGGGGGGGGACGACGAGGCCATGCACTACGACTCGGACTACATCCGCGCCCTGGAATACGGCATGGCACCGACCGGCGGGCTGGGCATCGGCATCGACCGCCTGGTGATGATGCTGACCGGCCGCGCCTCGATCCGCGACGTGCTGCTGTTCCCCTACATGCGCCCCGAGAACTGA
PROTEIN sequence
Length: 92
ELFINGKDIANGFSELNDPEDQAARFQAQVEAKQGGDDEAMHYDSDYIRALEYGMAPTGGLGIGIDRLVMMLTGRASIRDVLLFPYMRPEN*