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SCNpilot_cont_500_bf_scaffold_12936_4

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2944..3600

Top 3 Functional Annotations

Value Algorithm Source
Sensory/regulatory protein rpfC {ECO:0000313|EMBL:EZP46551.1}; EC=2.7.3.- {ECO:0000313|EMBL:EZP46551.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 214.0
  • Bit_score: 272
  • Evalue 4.10e-70
rpfC; Sensory/regulatory protein rpfC (EC:2.7.3.-) similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 214.0
  • Bit_score: 265
  • Evalue 1.50e-68
ATPase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D653D0 similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 217.0
  • Bit_score: 275
  • Evalue 5.80e-71

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GTGGCCATCACCGACCTGCACATGCCGGGCATGAGCGGCCTGGACCTGCTCAGGCAGCTGCGGGTGATGCAGGCCGGCGGCGGCCCGCGCACGCCGGTGGTGATCCTCAGCGCCGACGTCACGCCCGAGGCCATCCAGCGCTGCAACCAGGCCGGCGCGCATGCATTCATGGCCAAGCCGGTGGTCGCGGCCAGGCTGCTGGAAACGATGGCCGACATCGCCAGCGGCGCGGCGGCGGGTACCCGCGACATGGCCGCGGTGATCCCCACCTTCGCCGATGGCGACGCCGTGCTCGATACCGGCGTGCTCGACGAGCTGACCGCGCTGGGCATGGGCAAGGGTTTCGAACGCGAGTTCGTGCGCCAGTGCCTGGAAGACCTGGAGAGCGGCATCGGCGCCTTGCCCGGCGACGCGCAGGGCGAGGACTGGGCGCGCCTGCGCGAACACGCCCATGCGATCAAGGGCGTGGCCGCCAACCTGGGGTTGCTGAAAGTCGCCCGGCAGGGGGGAGAGTTGATGCGCATGGCCGACTGGCAACTCAAGGGCGAATGGAAACCGCTGCACGCACGCATCGGTGCCGCGCTGCTGGAGGGGCGCCAGGCGCTGGATGCGCGCGCCCAGGGGCGCGCGCAATCGCACGACGACGTGACCGGCTGA
PROTEIN sequence
Length: 219
VAITDLHMPGMSGLDLLRQLRVMQAGGGPRTPVVILSADVTPEAIQRCNQAGAHAFMAKPVVAARLLETMADIASGAAAGTRDMAAVIPTFADGDAVLDTGVLDELTALGMGKGFEREFVRQCLEDLESGIGALPGDAQGEDWARLREHAHAIKGVAANLGLLKVARQGGELMRMADWQLKGEWKPLHARIGAALLEGRQALDARAQGRAQSHDDVTG*