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SCNpilot_cont_500_bf_scaffold_15082_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(11230..11967)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 270.0
  • Bit_score: 404
  • Evalue 1.00e-109
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 270.0
  • Bit_score: 396
  • Evalue 6.10e-108
Formamidopyrimidine-DNA glycosylase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YXV3_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 270.0
  • Bit_score: 404
  • Evalue 7.20e-110

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGGAACTGCCCGAAGTAGAAACCACCCGCCGCGGCCTGGAGCCACACCTGCAGGGGCGTCGCATCCACGGCGTGATCCTGCGCCGGCCGGACCTGCGCTGGCCGATTCCGCCGGACATCGAGCGGGCGCTGCCCGGCCAGCGCATCGCCGCGATCCGCCGCCGCGCCAAGTACCTGCTGCTCGATACCGATGCCGGCAGCGCGCTGCTGCACCTGGGCATGTCCGGCAGCCTGCGCGTGCTGCCCGGCGACACCCCGGTGCGTGCCCACGACCACGTCGACATCAGCCTCGAGGATGGGCGCCTGCTGCGCTTCAACGACCCGCGCCGGTTCGGTTGCCTGCTGTGGCAGCCGCCGGGCGAAACCCACGAACTGCTGCGCGGGCTCGGCCCCGAGCCGCTGGACGCGGCGTTCGACGGCGACTACCTGTTCGCACGCAGCCGCGGCCGCAGCGCACCGGTCAAGAGCTTCCTGATGGATCAGCGCATCGTCGTCGGCGTCGGCAACATCTACGCCGCCGAAAGCCTGTTCATGGCCGGGATCAACCCGCTGCGCGAGGCCGGCGGCACCACCCTGCGCGATTTCATCAGTCCCGACGGCGCCCCCGGCTACTTCGAGGAGGAGCTGTCGGTATACGGCCGCGAGGGCCAGGCCTGCGTGCGCTGCGGGCGCCCGCTGCGCCATGCCAGCATCGGCCAGCGCGCCAGCGTGTGGTGCGGCCACTGCCAGCGCTGA
PROTEIN sequence
Length: 246
MPELPEVETTRRGLEPHLQGRRIHGVILRRPDLRWPIPPDIERALPGQRIAAIRRRAKYLLLDTDAGSALLHLGMSGSLRVLPGDTPVRAHDHVDISLEDGRLLRFNDPRRFGCLLWQPPGETHELLRGLGPEPLDAAFDGDYLFARSRGRSAPVKSFLMDQRIVVGVGNIYAAESLFMAGINPLREAGGTTLRDFISPDGAPGYFEEELSVYGREGQACVRCGRPLRHASIGQRASVWCGHCQR*