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SCNpilot_cont_500_bf_scaffold_20576_5

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3312..5183

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide repeat family n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CL50_XANCA similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 627.0
  • Bit_score: 631
  • Evalue 1.20e-177
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 627.0
  • Bit_score: 631
  • Evalue 3.80e-178
  • rbh
Tetratricopeptide repeat family {ECO:0000313|EMBL:AEL09129.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 627.0
  • Bit_score: 631
  • Evalue 1.70e-177

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATGGGCGACCTGCGCAACCTGACCGGCAATGCACTGCTGGACGATTCGGTGATGCAGGCCCTGCGTGTCAGCCTGGAGCAGTCGCGGCATGTCAACGTGCTGAGCGACATGAAGACGCGCGACACGCTGTCGCGCATGCGCCGTGATCCCGCGGTATCCCGCCTGGACCGCACCTTGGCATCGGAAGTGGCGCTGCGCGACGGCGCACGTCTGGTCATACTGCCTGCGGTCTCCGAGGTGGGGGGCAAGCTGCGCCTGAGCATGGAGATCGTCGACCCGCATACCCAGATCACGATCCGTTCGGATTTCGTCGATGGCCGCGGCCTGGAATCCCTGCTGGCCTCGGTCGACGCCATCGCCTTGCGCCTGCGCGGCCATCTGGGTGAAACCAGTGCGTCGGTCAAGGCCGCGTCCCAGCCATTGCCATCGGTTACGACCTCCAACCTCCACGCCCTGCGCGCCTATGCGCTTGGATTGCAGGCCACTCGTCAGGGAAAGTGGCAGCAGGCGATGCAGATGTATGGCGAGGCAACAACGCTGGATCCCGAATTCGCGCTTGGCTACCTTGGCGCGGCGCGTGTCATGGTGGCGCGTTCGGAGCGACCAGCGGCCATGCCTTTCCTCGACCGCGCATTGGCACTGAGGCACCGCCTGCCCGATCGCGAGCGCCTTTACCTGGACGCCTGGGAGGCCGAGCTGCGGGCGCCGGCGCAGGCATTGGAGAAATGGCAGCTCATGGCAGGCCTCTATCCCGACGACTTTGCCGGCCAGGCCAACTCTGCCTGGCACCTGTTTTCGGCCAATCGGATGGATGAGGCATTGCCCTACGCGCAGGCCGCCGACGTACCGCAGGATCCGTTGCGACCGCTGGCGGCTGATTTCCTGGCGCGAATCCTGCTGGCCAAGGGAGCGACGGAGCCAGCGTTGAAGCGGCTGCGCGAAATCGGGAATGAGACCCAGGCAGGTCAGGGGCGGCGGATCGCCAACGTGCTGGCGGTGCTTGAGCGGCCGGCAGAAGCCATGGCCGCGCTGGAAGCCATCAAGCCCAGCGGCTACGCGGGCACCGACCTGGTGCCGATGATCGATCGGGTGTCGCTGGCGCTTGACCAGGGTAAATGGACGCAGGCCAGGGCGGCGGCGGATGGTGCACTGGAGACCAGCGCCACGCAGGAAGCGTTCTTGAACCTGCAGTTCCGCTTCATCTCGGGCGTGGTGGCGCAGATGACCGGTGTGTCCTTGCCGAGATCACGCCGTGCGGCCACCGCCCAGGCCTTGGTGGGCGCGATAGCCGATCCTGCCTGGGACCCTTCCAATCGCATGGATCTGACGTCGATGCTGTTGGCCAATGCCTGGCTGGCACAGCGTGATGGTGATTCCAGCCTGGCGGCCGATGCCCTGAGGCAGGTCGATGCATTGCCGGACAAGGGGAGGCTCGGGGCAACCACGGCCGCGTTGCAGCGAATCGTGCAGGCCGGTCAACTGGCTGCCAACGGGCGTCACGACGAGGCCAGCAGGTTGCTATCGCCCCGTGCCGACGATCTCTACCAGTCGCGGGTCGCACTGTACCGCGTGCTGGCCGCCTCGGGCCGCCATGCCGAAGCCGAAACGCAGGCGCGCTGGCTGTTGCAGCGGCGCGGTCTGGCCTATGTCGAAGCCAATGCGTCGCAGGCGCTGCAGCCCTTGAACGTCGCTGACTCACGGCTAGCGCGGCTTTGGCTTGCCGAGTCGTTGGCGGCACAGGGAAAGAACAGCCAGGCCACTGCCGAAATCCAGGTCTTCCTGCGGCAGTGGCCTGCCTCGGTACTGTCTCCTCAGTTGCTGTCCAGGGCCGAAGCGATCCTTTCGGCTTCGAAGCAGAAGATCACAGCGTGA
PROTEIN sequence
Length: 624
MGDLRNLTGNALLDDSVMQALRVSLEQSRHVNVLSDMKTRDTLSRMRRDPAVSRLDRTLASEVALRDGARLVILPAVSEVGGKLRLSMEIVDPHTQITIRSDFVDGRGLESLLASVDAIALRLRGHLGETSASVKAASQPLPSVTTSNLHALRAYALGLQATRQGKWQQAMQMYGEATTLDPEFALGYLGAARVMVARSERPAAMPFLDRALALRHRLPDRERLYLDAWEAELRAPAQALEKWQLMAGLYPDDFAGQANSAWHLFSANRMDEALPYAQAADVPQDPLRPLAADFLARILLAKGATEPALKRLREIGNETQAGQGRRIANVLAVLERPAEAMAALEAIKPSGYAGTDLVPMIDRVSLALDQGKWTQARAAADGALETSATQEAFLNLQFRFISGVVAQMTGVSLPRSRRAATAQALVGAIADPAWDPSNRMDLTSMLLANAWLAQRDGDSSLAADALRQVDALPDKGRLGATTAALQRIVQAGQLAANGRHDEASRLLSPRADDLYQSRVALYRVLAASGRHAEAETQARWLLQRRGLAYVEANASQALQPLNVADSRLARLWLAESLAAQGKNSQATAEIQVFLRQWPASVLSPQLLSRAEAILSASKQKITA*