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SCNpilot_cont_500_bf_scaffold_18396_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(56..883)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheW n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030CEEC2 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 283.0
  • Bit_score: 281
  • Evalue 7.90e-73
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EED38205.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 286.0
  • Bit_score: 278
  • Evalue 1.20e-71
chemotaxis protein; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 280.0
  • Bit_score: 277
  • Evalue 4.70e-72

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Taxonomy

Stenotrophomonas sp. SKA14 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAACGGCACCGACGTGCTGGACGACTATCTGGGCGAACTATTGCTCGACGCGATGCCCGCACCGGCGCCGATACAGGTGCCGGCAGCGCCCGCCCGCGCGGCTGCGACGGCGTCGGTCGCGCCAGATGCCGTCCCGCCGCCGCCGCTCCCTGCCACCCCCGCCCCGGCAGCGCCTGCGGCCACGGCGGCCAGCCCGGTGACGCCGGTTGTCGTGCCCGCTGTGGCAGCGCCGGTGCCGGCCCCCGCGCCTGCCCCTGCGCGGGCCCCTGCACGCAGCGCCGCCGCACCGGCGGTCGACGAAGCCGCGCCGCCGGCAGTGGCCGACGGCGACAATGTCTGGGCCGCACTGCAGGCGCAGGCACGCGAGCCACAACGGCCGCAGCGCCGGGCCAGCGAACGCACCTCGCGCTGGCTGCGCCTGCGCTGCGGCACCCAGGCCTATGCGCTGGAGCTGCTCAAGGTGCAGGAAGTGGTGCTGCCGGTACCGCTGCTGGGCCTGCGCGGCACCGCCGCCTCGATGCTCGGCATCATGAACCTGCGCGGCCAGGTGGTACCGGTGATCGACCTGGGCCTGCACCTGGGCTTCGCCGCGGTGGGCGAAGGCAGCCAGACCCGCATCGTGGTGCTCGAGGAAAAGGGCGAGGTGCTGGGCCTGCGGGTGTCCGCGGTGGAGGACGTGGCCAACCTGACCGAGTCGCAGATCGAGCCGCCCGATACCGCGCGCATCTGCCAGATCTCCAACACCCTGTTCCGCGGCGTGGCCCGCATCGGCCAGCAGCCGATGATCCTGCTCGATGCGTCCGAACTGCTGCAGTGCGAGCGCTGA
PROTEIN sequence
Length: 276
MNGTDVLDDYLGELLLDAMPAPAPIQVPAAPARAAATASVAPDAVPPPPLPATPAPAAPAATAASPVTPVVVPAVAAPVPAPAPAPARAPARSAAAPAVDEAAPPAVADGDNVWAALQAQAREPQRPQRRASERTSRWLRLRCGTQAYALELLKVQEVVLPVPLLGLRGTAASMLGIMNLRGQVVPVIDLGLHLGFAAVGEGSQTRIVVLEEKGEVLGLRVSAVEDVANLTESQIEPPDTARICQISNTLFRGVARIGQQPMILLDASELLQCER*