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SCNpilot_cont_500_bf_scaffold_27171_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1215..1808

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D298EE similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 196.0
  • Bit_score: 334
  • Evalue 7.30e-89
  • rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 193.0
  • Bit_score: 335
  • Evalue 6.00e-89
multiple antibiotic resistance (MarC)-like protein similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 194.0
  • Bit_score: 328
  • Evalue 1.30e-87
  • rbh

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGACGATCCTCTCCGCCGCGCTGCTGCTGTTCCTGATCCTGGATCCGCTGGGCAACATCCCGGTGTTCCTCAGCCTGCTCAAGCCGCTGGCGCCCCGCCGCCAGCGCGTGGTCCTGGTGCGCGAGCTGCTGATCGCGCTGGCGGTGCTGATGGCCTTCCTGTGGGGCGGCAAGTACGCGCTGGAGCTGATGCACCTGCGCCAGGAGTCGGTATCGATTGCCGGCGGCATCGTGCTGTTCCTGATCGGCATCCGCATGATCTTCCCGCGGCCGGAAGGGCTGATGGGCGCGGTGCCCGATGGCGAGCCGTTCATCGTGCCGATGGCGATTCCGCTGGTGGCCGGTCCATCGGGCATGGCGGCGGTCATGCTGATGGGCAGCAACGAGCCCGACCGGCTGGGGGAGTGGAGCCTGGCGCTGCTGCTGGCCTGGGGGGCCACGGCGGCGATCCTGATGTCGGCCACGCTGCTCTACAAGCTGCTCGGGGCGAGGGCGCTGACCGCGCTGGAGCGCCTGATGGGCATGCTGCTGGTCGCGATTTCCGTGCAAATGTTGCTTGATGGTGTCGCTGTCTACCTGGCGTCGATTCCGTAA
PROTEIN sequence
Length: 198
VTILSAALLLFLILDPLGNIPVFLSLLKPLAPRRQRVVLVRELLIALAVLMAFLWGGKYALELMHLRQESVSIAGGIVLFLIGIRMIFPRPEGLMGAVPDGEPFIVPMAIPLVAGPSGMAAVMLMGSNEPDRLGEWSLALLLAWGATAAILMSATLLYKLLGARALTALERLMGMLLVAISVQMLLDGVAVYLASIP*