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SCNpilot_cont_500_bf_scaffold_30038_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 466..1965

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 500.0
  • Bit_score: 948
  • Evalue 1.10e-273
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:EQM78668.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EQM78668.1};; Flags: Fragment;; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 500.0
  • Bit_score: 948
  • Evalue 5.00e-273
DNA-directed RNA polymerase subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F12B similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 500.0
  • Bit_score: 948
  • Evalue 2.70e-273

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGACGTCCTATTCGTACACCGAAAAAAAGCGCATCCGCAAGGATTTCGGCAAGCAGCGCTCGATCCTCGAGGTGCCGTTCCTGCTGGCCATCCAGGTCGACTCCTACCGCGAGTTCCTGCAGGAGAACACTGACCCGGCCAAGCGCTCCGACCACGGCCTGCACGCCGCGCTGAAGTCGGTGTTCCCGATCTCCAGCTACAGCGGCAACGCCGCCCTGGAGTACGTGGGCTACAAGCTGGGCGAGCCGGTGTTCGACGAGCGCGAGTGCCGCCAGCGTGGCATGAGCTACGGCGCCCCGCTGCGCGTGACCGTGCGCCTGGTCATCTACGACAAGGAATCGTCCACCAAGGCGATCAAGTACGTGAAGGAGCAGGAGGTCTACCTCGGCGAAATCCCGCTGATGACCGACAACGGCACCTTCATCGTCAACGGTACCGAGCGCGTCATCGTTTCGCAGCTGCACCGTTCGCCGGGCGTGTTCTTCGACCACGACCGCGGCAAGACGCACAGCTCGGGCAAGCTGCTGTACAGCGCCCGCATCATTCCTTACCGCGGCTCCTGGCTGGACTTCGAGTTCGACCCGAAGGACGCGCTGTTCACCCGTATCGACCGCCGCCGCAAGCTGCCGGTGTCGATCCTGCTGCGCGCGCTCGGCTACAACAACGAAGAAATGCTCAACGAGTTCTTCGACATCAACACCTTCCACATCCTGCCGGAAGGCGAGGGCGTGCAGCTGGAGCTGGTGGCCGAACGCCTGCGTGGCGAGACCCTGGGCTTCGACCTGGCCGATGGCGACAAGGTCATCGTGGAAGCCGGCAAGCGCATCACCGCGCGCCACGTCAAGCAGCTGCAGGCCTCGGGCATCGCCGCGCTGGCCGTGCCGGACGACTACCTGGTGGGCCGCATCCTGTCGCATGACGTGGTCGACGCCAACACCGGCGAACTGCTGGCCCAGGCCAACGACGAGATCACCGAAGAGCAGCTGCAGAACTTCCGCAAGGCCGGCGTGGATGCGGTCGGCACCCTGTGGGTGAACGACCTGGACCGTGGCCCGTACCTGTCCAACACCCTGCGCATCGACCCGACCAAGACCCAGCTCGAGGCCCTGGTCGAGATCTACCGCATGATGCGCCCGGGCGAGCCGCCGACCAAGGACGCCGCGCAGAACCTGTTCCACAACCTGTTCTTCACCTTCGAGCGCTACGACCTGTCCACGGTCGGCCGCATGAAGTTCAACCGCCGTGTCGGCCGCAAGGAAGTCACCGGCGAAGCCGTGCTGTACGACAGCAAGTACTTCGGCGAGCGCAACGACGAAGAGTCCAAGCGCCTGGTCTCCACCCATGGCGACGGGTCCGACATCCTGGACGTGATCAAGGTCCTGACCGAGATCCGCAACGGCCGTGGCGTGGTGGACGACATCGACCACCTGGGCAACCGCCGCGTGCGTTCGGTCGGCGAAATGGCCGAGAACGTGTTCCGCGTGGGCCTGGTCCGCGTC
PROTEIN sequence
Length: 500
MTSYSYTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENTDPAKRSDHGLHAALKSVFPISSYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDKESSTKAIKYVKEQEVYLGEIPLMTDNGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYNNEEMLNEFFDINTFHILPEGEGVQLELVAERLRGETLGFDLADGDKVIVEAGKRITARHVKQLQASGIAALAVPDDYLVGRILSHDVVDANTGELLAQANDEITEEQLQNFRKAGVDAVGTLWVNDLDRGPYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSTVGRMKFNRRVGRKEVTGEAVLYDSKYFGERNDEESKRLVSTHGDGSDILDVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRV