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SCNpilot_cont_500_bf_scaffold_28426_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1204..1857

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Xanthomonas oryzae RepID=UPI0002E57B92 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 220.0
  • Bit_score: 224
  • Evalue 1.20e-55
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 220.0
  • Bit_score: 220
  • Evalue 7.00e-55
LysR family transcriptional regulator {ECO:0000313|EMBL:KGR59678.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 220.0
  • Bit_score: 219
  • Evalue 4.10e-54

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Taxonomy

Xanthomonas vasicola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGTCTTTCCCTGCGCCAGCTGCAGATCTTCTCCGCCATCGCCGGGACCGGAACCACCACTGCCGCCGGGGACAGCATCGGGCTGTCGCAATCGGCGGTGAGCGCGGCGCTGGGCGAGCTGGAGCATCTGCTCGGGCTTGCCGTGTTCGACCGCGTCGGCCGACGGCTGGTGCTCAACGGCCACGGCCGCGCGCTGCTGCCCGAGGCGCGCGCCCTGCTGGCGGCCGCGGAGGACATCGAACGCCGCTACCGCGGGGGCGGCGAGACCACCGCCCCGGTGCGCTGGCGGGTGGGGGCCAGCACCACCATCGGCAACTATCTGATGCCGGCGCGCATCGCCGACCTGCGCGATGGCAACGACCATGCACGGGTCGACCTGGTGATCGGCAATACCCGCGAAGTCGCCAGTGCGGTGCAGCGGCTGGAGGTGGACATCGGCCTGATCGAGGGCCCATGCCACGAACCGGGGCTGGACGTGGCGGCCTGGCGCGAGGACGAGCTGGTCATCGTGTTCGGCGATCGCCACCGGCAGGCGGCCGCGCTGCGCGCCGGTGCCGACATGGCGCAGCTGCGCGGCGCCTGCTGGCGCTGGATGAAGGTACGTTCGCCGACGCCTGAGCGCGGCTCCCGTACAATGCGCGCATGCCTTTGA
PROTEIN sequence
Length: 218
MRLSLRQLQIFSAIAGTGTTTAAGDSIGLSQSAVSAALGELEHLLGLAVFDRVGRRLVLNGHGRALLPEARALLAAAEDIERRYRGGGETTAPVRWRVGASTTIGNYLMPARIADLRDGNDHARVDLVIGNTREVASAVQRLEVDIGLIEGPCHEPGLDVAAWREDELVIVFGDRHRQAAALRAGADMAQLRGACWRWMKVRSPTPERGSRTMRACL*