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SCNpilot_cont_500_bf_scaffold_31374_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(3..398)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 132.0
  • Bit_score: 219
  • Evalue 5.50e-55
Ribosomal large subunit pseudouridine synthase A n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L096_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 132.0
  • Bit_score: 219
  • Evalue 1.80e-54
Pseudouridine synthase {ECO:0000313|EMBL:ACF50496.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 132.0
  • Bit_score: 219
  • Evalue 2.50e-54

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
GTGATCGGACTGCACTACATCGACGAGGCGCTGCTGGTGGCGGAGAAGCCCGCCGGCCTGCTCTCGGTACCCGGGCGCCTGCCGGAGAACCAGGACTGCCTGGTGGCACGCCTGCAGGCGTCGTATCCGGACGTGCTGACCGTGCACCGGCTGGACCAGGTGACGTCGGGTCTGATGCTGTACGCACGCGGCAGGCAGGTGCAGGCGGCCCTGTCGATGCAGTTCGAGCAGCGGCGGGTGCACAAGCGCTACCAGGCGGTGGTGGAAGGGCAGGTCGCGGGCGAGGCGGGCGAGATCGCGCTGCCGCTGATCTGCGACTGGCCGAACCGGCCCAGGCAGATGGTGGACCTTGAACGGGGCAAGCCGGCGCTGACCCGCTGGCGGGTGCTGGCGCGC
PROTEIN sequence
Length: 132
VIGLHYIDEALLVAEKPAGLLSVPGRLPENQDCLVARLQASYPDVLTVHRLDQVTSGLMLYARGRQVQAALSMQFEQRRVHKRYQAVVEGQVAGEAGEIALPLICDWPNRPRQMVDLERGKPALTRWRVLAR