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SCNpilot_cont_500_bf_scaffold_31990_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1262..1867)

Top 3 Functional Annotations

Value Algorithm Source
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 201.0
  • Bit_score: 307
  • Evalue 1.40e-80
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 200.0
  • Bit_score: 300
  • Evalue 2.90e-79
homoserine dehydrogenase, partial n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003742FC5 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 201.0
  • Bit_score: 311
  • Evalue 6.80e-82
  • rbh

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
CCGCTGCTGTCCAGCATCCGCGCGCTGGTGGCCGGTGGCGACCATGTGCATGCCATCGAAGGCGTGCTGTCCGGTTCGCTGGCATGGCTGTTCCATCGTTTCGACGGCAGCCAGCCGTTCTCCGCCTGCGTGCGCGAAGCGGCGGCGGCCGGTTACACCGAACCCGATCCGCGCATCGACCTGTCCGGCGAGGACGTGCGCCGCAAGCTGCTGATCCTGGCGCGCGCGGCCGGGGTGGCGCTGGAGCCGGAACAGGTGGAGGTCGAGTCGCTGCTGCCGCCGGCGCTGGCGGCATTGCCGGCCGCGCAGGTGGACGCCGCGCTGGTGCAGCTGGACGCGCCCCTGGCGGCGCGCCTGCAGCAGGCGCGCGGGCAGGGGCTGTCGCTGTGTTTCGTGGCGCGCCTGGACGGGCACGGCGCCAGCGTCGGCCTGCGCGCGTTGCCGGCCGACCATCCGCTGGCCGGCGGCCGCGGCACCGACAACCGGGTGGCGATCCGCAGCGACCGCTACTGCGGGCAGCCGCTGCTGATCCAGGGGCCGGGCGCCGGTGCCGACGTCACCGCGGCCGCGCTGCTGGACGACGTGCTGGGCATCGCCAGGCGCTGA
PROTEIN sequence
Length: 202
PLLSSIRALVAGGDHVHAIEGVLSGSLAWLFHRFDGSQPFSACVREAAAAGYTEPDPRIDLSGEDVRRKLLILARAAGVALEPEQVEVESLLPPALAALPAAQVDAALVQLDAPLAARLQQARGQGLSLCFVARLDGHGASVGLRALPADHPLAGGRGTDNRVAIRSDRYCGQPLLIQGPGAGADVTAAALLDDVLGIARR*