ggKbase home page

SCNpilot_cont_500_bf_scaffold_41600_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1..420)

Top 3 Functional Annotations

Value Algorithm Source
multidrug MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E8746E similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 141.0
  • Bit_score: 187
  • Evalue 1.00e-44
polysaccharide biosynthesis protein CapD similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 138.0
  • Bit_score: 186
  • Evalue 5.50e-45
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ACF51356.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 138.0
  • Bit_score: 186
  • Evalue 2.50e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGCGGTCTGGCGACAGCTGGCAGGAAATTTTCCGCGCATCGCGGTGATGCTGCATGACCTGGTCATGGTATGGGCGTGCTGGCAACTGCTGCACATTGCCCGCTATGCGATGCTGGAGGGCGCCCCGGCCATTCAGCCGCTCAGCTTCGATATTGCCATCGTGATGCTGCTGCAGGCCATGGCGTTCCATTACGTGGGCCTGTACCGCGGGCTTTGGCGCTTCGCCAGCGTCACCGACCTGGTCAACATCTTCAAGGCCTGCTTCATCGGCGTGGGCGCGATCGTCCTGGTGTTCAGCTACCGGCGCCTGAATGGCATTCCCATGTCCGTGCTCGCGATCTATCCGTTCGCGCTGGCGGCCCTGCTCGGCGGGCCACGTCTTCTGTACCGTGCATGGAAGGACCACCAGTCGATCCAT
PROTEIN sequence
Length: 140
MAVWRQLAGNFPRIAVMLHDLVMVWACWQLLHIARYAMLEGAPAIQPLSFDIAIVMLLQAMAFHYVGLYRGLWRFASVTDLVNIFKACFIGVGAIVLVFSYRRLNGIPMSVLAIYPFALAALLGGPRLLYRAWKDHQSIH