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SCNpilot_cont_500_bf_scaffold_48007_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2..229)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DA52FE similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 76.0
  • Bit_score: 120
  • Evalue 6.40e-25
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 76.0
  • Bit_score: 115
  • Evalue 3.80e-23
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 76.0
  • Bit_score: 109
  • Evalue 4.60e-22

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
ATGTCCCGCGTAGCCAAGAAGCCGATCAACCTGCCCAAGGGCGTTGAACTGAACATCCAGCCGGAATCCGTGAGCGTGAAGGGCCCGAAGGGCACCCTGTCGCTGAACAAGGCCGCTAGCGTTGAAATCACCATCGACAATGGCGTCGTCACGCTGAATCCGAAGGACATCTCCTTCGACGCGCTGACCGGCACGGTGCGTTCGATCCTGGCCAACATGGTCAAGGGC
PROTEIN sequence
Length: 76
MSRVAKKPINLPKGVELNIQPESVSVKGPKGTLSLNKAASVEITIDNGVVTLNPKDISFDALTGTVRSILANMVKG