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SCNpilot_cont_500_bf_scaffold_2387_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2150..3265)

Top 3 Functional Annotations

Value Algorithm Source
Plasmid encoded RepA protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I760_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 363.0
  • Bit_score: 345
  • Evalue 6.00e-92
  • rbh
Plasmid partitioning protein RepA {ECO:0000313|EMBL:EYR79536.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 371.0
  • Bit_score: 634
  • Evalue 1.20e-178
plasmid encoded RepA protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 363.0
  • Bit_score: 345
  • Evalue 1.90e-92
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGACCGACACCTTTACGCCTGACCTGTCCATAATCCGCGATACCGATCTGAAAAAGAAGCTCGCCCAGGCCCGCGAGCGGTTCAAGATGGACGCGGTGTTTGCTGTGGAAGCGGGCGAGATATTGGCCGAACAGGTCGCACGCGATGCGAAGGCCCAAGCCCGCGCCAACGAGGTTGCCGCCATGGCACCGGGTGCCCGCCGCCGTGCCAAGAGCAAGGATGCCCTTGAAAAGGGTGGCGAGCGCCAAGACCTCCGCCATATCCACAGCGTTCTGGCGTTGTGCGGCTTGCCCTATAGCCGCCAGTCGATTGAAGAGCGTGAATACCGCAGCAAGCAAGGCAATATGCGCCTCATCGTCAACGCCGGGGAGCTGTTGTCGCCCCAAGGTGAGTTCGTCAAACAGCCTCTGCCCTACGGCTCAAGGGCGCGGCTGCTTCTCCTGCACCTGTGCAGCGAGGCCATTCGCCAGCAATCGCCCACCATCAACATCGATGACAGCCTGACCGCCTTCATCAACAAGATGGGTTTTGATGCCAATGGCGGGCCACGCGGCAACCTGACTGCCTTCAAGCAGCAGGTTAACGCGCTGGCCGCCTGCAAGATGACCATCGGCACCTTTGACGAGAAGGGCGGCCGGGCAAAGACCGTCAACACGGCGCCGTTCGCCTCGCTGGACGTATGGTTCCCGACCAACCCCGGCCAGCAAATGCTTTGGCCCAGTACCATCACGTTCACCCGCGAGTTCTATGACACACTCGCCAGGCACGCCTTGCCGGTGAATGTCCACGCCATTCGCGCGTTTTCGGATTCGCCCCGCAAAATCGACATTTACTATTGGCTTAGCCACCGCAGTTACAGCCTCAACGAGCCGATTTCCATCAGTTGGGAAGCCTTGAAGGAACAGTTCGGGGAGGGGCATTTCGTGACCTCCGGAAAGACCGGCGGTTACGCGCGCGACCGCGATTTCAGGGCCAAATTCAAGCAGGAGCTAGCCCACATCTGCGAGGTTTTCCCGAAACTGCCCGTGACCGTCACGGAGACCGGAATCCGGCTGAAACCGGCCGATTCTGATGTCCTGTCAATCCCGGCCAAGCGTTCCACGAAAAAAGCGTGA
PROTEIN sequence
Length: 372
MTDTFTPDLSIIRDTDLKKKLAQARERFKMDAVFAVEAGEILAEQVARDAKAQARANEVAAMAPGARRRAKSKDALEKGGERQDLRHIHSVLALCGLPYSRQSIEEREYRSKQGNMRLIVNAGELLSPQGEFVKQPLPYGSRARLLLLHLCSEAIRQQSPTINIDDSLTAFINKMGFDANGGPRGNLTAFKQQVNALAACKMTIGTFDEKGGRAKTVNTAPFASLDVWFPTNPGQQMLWPSTITFTREFYDTLARHALPVNVHAIRAFSDSPRKIDIYYWLSHRSYSLNEPISISWEALKEQFGEGHFVTSGKTGGYARDRDFRAKFKQELAHICEVFPKLPVTVTETGIRLKPADSDVLSIPAKRSTKKA*