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SCNpilot_cont_500_bf_scaffold_2387_19

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 12208..13107

Top 3 Functional Annotations

Value Algorithm Source
Putative integrase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGY7_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 299.0
  • Bit_score: 372
  • Evalue 3.70e-100
  • rbh
Putative integrase {ECO:0000313|EMBL:CEL26563.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 299.0
  • Bit_score: 420
  • Evalue 2.80e-114
integrase similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 286.0
  • Bit_score: 311
  • Evalue 3.20e-82
  • rbh

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAAAAGCCTACACTTCGACCTCCTCAACCTGACCCGCCACAACGGGGAGGGGTCTTATTCGACCCAAGCGTGCCGCGCACGAGGCCTTCAGCAGTTGGCCGACGAGCTGCACGCCTTGGGTTATAAATTGCAAGCTGCCAAGCACCTGAAGCCGCGCCATGTGGAGGCGCTTGTAGCTAGTTGGAAGGCAAACCGCCTCAGTGACGGCACAATCCGCAACCGGCTGGCATGGGCGCGCTGGTGGCTGCGACACGTTGATAAGAGCCGCGCCATTGCCGCCAGCAATGAGGGATACGGTTTGCAGCGCCGGGAACGCTTCAAGGGCAACCGCGCCCGTCGCCTCGATGCCGACGCCCTTGCCCGCCTCAACGATGAGCGGGTGGCCCTCGCCCTCAAGCTGGAAGCCGCTTTTGGTCTGCGCCGGGAAGAGGCCCTAAAGATGTTCCCCCGCATGGCTGACCGGGGCAACCGGCTCATCCTGCAAGCCAGTTGGACGAAAGGCGGCCGGTATCGAGAAATCCCTATCGTGCACCCGAAACAACGGGCGCTCCTCGAGGAGATTAAAGCCTTATGTGGCGATGGGAGTCTGATAGGCGATGGCCGGAACTACAAGCGCGCCCTGAAGCATTACGAATATACCACCCTCAAGGCCGGGCTTCGGAATTGTCACGCTTACCGTCATGCTTACGCCCAGTGGCGATACAAAGCCCTCACCGGCTGGGCCTGTCCCGCTGCGGGCGGTCCAACCCGCGGCGAGATGACCGCGGCACAATGGGAAACTGACCGGCGCGTACGGCTCGAAATTTCCCACGAGCTGGGGCACGGCCGCATTGACGTGACAGACACCTACCTCGGCCGGGCCATTCCGGCACGGGTGCAGGAAAGCCGCGCCGCATGA
PROTEIN sequence
Length: 300
MKSLHFDLLNLTRHNGEGSYSTQACRARGLQQLADELHALGYKLQAAKHLKPRHVEALVASWKANRLSDGTIRNRLAWARWWLRHVDKSRAIAASNEGYGLQRRERFKGNRARRLDADALARLNDERVALALKLEAAFGLRREEALKMFPRMADRGNRLILQASWTKGGRYREIPIVHPKQRALLEEIKALCGDGSLIGDGRNYKRALKHYEYTTLKAGLRNCHAYRHAYAQWRYKALTGWACPAAGGPTRGEMTAAQWETDRRVRLEISHELGHGRIDVTDTYLGRAIPARVQESRAA*