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SCNpilot_cont_500_bf_scaffold_5860_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3496..4125)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003711B9B similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 183.0
  • Bit_score: 238
  • Evalue 4.50e-60
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAK72773.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 195.0
  • Bit_score: 237
  • Evalue 1.40e-59
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 195.0
  • Bit_score: 231
  • Evalue 2.20e-58

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGTCAATACGCAGTTCGAAAATTACGAATCCCGTTGTGACGGAAGAATTGGCCGGAAATGCGAACGGCGGCAAAACTCGTCCGCGCGAGCGCATCGTTTCCGCCGCCTGCACGCTGTTTCGCGAAAACGGCATCCGCGCCACCGGCGTGGAGGCCATCGCCGAGGCCGCCGACACCAACAAGATGACGCTCTATCGCCATTTCGGCTCCAAGGACGAGCTGATCTGCGAAGCGCTGAAATGCATCTCGGATCGCCATGCCGCCTTCTGGGAAAAACTGACGGCGGATTTTCCCGACGATTCGCAGGCCCGCCTGCTGGCCTGGGTAGAATTGCGCGCCGCCTCGCTGGTGGACGAACCGCATGGCTGCGACCTCAGCAACGCCGCCGTCGAGCTGAAGGAAACCGACCATCCCGCTCATGCCGTCATAGAGCAGGTGAAGGCGGCCCAGCATCGTCGCCTCGTGGCTCTGTGCGCCGACGCCGGCAGCCGCGACCCGGATCTTCTGGCCAATACACTTGCCATGCTGCTGGAAGGCGCGCGCGTCAGCCGCTGCGCTTCCGGGGCGGAAGGGCCGTGCAGACAATTTTCCCGCGCCTGTCACGCCGCCATCGCTGCCTTTCGAAATTAG
PROTEIN sequence
Length: 210
MSIRSSKITNPVVTEELAGNANGGKTRPRERIVSAACTLFRENGIRATGVEAIAEAADTNKMTLYRHFGSKDELICEALKCISDRHAAFWEKLTADFPDDSQARLLAWVELRAASLVDEPHGCDLSNAAVELKETDHPAHAVIEQVKAAQHRRLVALCADAGSRDPDLLANTLAMLLEGARVSRCASGAEGPCRQFSRACHAAIAAFRN*