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SCNpilot_cont_500_bf_scaffold_5386_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3022..3837

Top 3 Functional Annotations

Value Algorithm Source
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 271.0
  • Bit_score: 471
  • Evalue 7.40e-130
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 271.0
  • Bit_score: 468
  • Evalue 1.80e-129
  • rbh
indole-3-glycerol-phosphate synthase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035C9055 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 271.0
  • Bit_score: 472
  • Evalue 3.10e-130
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGACGGACATCCTGCGCAAGATCGAAGCCTACAAGCGCGAGGAAATCGCCGCCGCCAAGGCGCGCACCTCGCTTGCCGACCTCAAGGCCATGGCCGCCGGCCAGCCGGCTCCGCGCGGCTTCTATAGGGCGTTGCGGGCCAAGCAGGCGGACGGTCTTTTCGGCCTGATCGCCGAGATCAAGAAGGCCAGCCCCTCCAAGGGCCTGATCCGTCCGGATTTCGATCCCCCGGCGCTTGCCAAGGCTTACGAAGCCGGCGGCGCGGCCTGCCTTTCGGTGCTGACGGATACGCCGAGCTTCCAAGGCGCGCCCGAATTCCTGGCCGCCGCCCGCGACGCCTGCGCCCTGCCGGCGCTACGCAAGGATTTCATGTTCGAGACCTATCAGGTGCATGAAGCCCGCGCCTGGGGCGCGGATTGCATCCTGCTGATCATGGCAAGCCTCAGCGACGACGACGCCAAACGCCTGGAAGACGAAGCCTTCTCGCTCGGCATGGACGTGCTGGTGGAGGTGCATGACGCCGAAGAGATGGAACGGGCGCTGAAACTCGCCTCGCCGCTGGTCGGCATCAACAATCGCAACCTGCGCACCTTCGAGGTCAGCCTGACGGTATCCGAGGAACTGGCCGGCATGGTCCCTGCCGACCGGCTGCTCGTCGGCGAAAGCGGCATCTTCACCCATGCCGATTGCGAACGGCTGAAGGCAAGCGGCATCTCCACCTTCCTCGTTGGTGAAAGCCTGATGCGGAAGGACGACGTGGCCGCCGCGACCCGGACGCTGCTGACCGGCGACGCCGGCATTCTCGCAGCGGAATGA
PROTEIN sequence
Length: 272
MTDILRKIEAYKREEIAAAKARTSLADLKAMAAGQPAPRGFYRALRAKQADGLFGLIAEIKKASPSKGLIRPDFDPPALAKAYEAGGAACLSVLTDTPSFQGAPEFLAAARDACALPALRKDFMFETYQVHEARAWGADCILLIMASLSDDDAKRLEDEAFSLGMDVLVEVHDAEEMERALKLASPLVGINNRNLRTFEVSLTVSEELAGMVPADRLLVGESGIFTHADCERLKASGISTFLVGESLMRKDDVAAATRTLLTGDAGILAAE*