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SCNpilot_cont_500_bf_scaffold_6884_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 5151..7028

Top 3 Functional Annotations

Value Algorithm Source
type I secretion system ATPase, PrtD (EC:3.6.3.25) similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 633.0
  • Bit_score: 896
  • Evalue 3.70e-258
  • rbh
Putative ATP-binding component of ABC transporter n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UG94_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 631.0
  • Bit_score: 902
  • Evalue 2.80e-259
  • rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJF69234.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 633.0
  • Bit_score: 903
  • Evalue 2.30e-259

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1878
ATGAATTACGTGTTGAGAGGGACGGTTTCCTGGCAACCGCCCATGCGGCAGGACGCAGTCCGCCGGGGCGGCTCCGAAGGCGATGTGATGGATGCCTGCATCCAGGCCATCAATGACGCCGTCGAGGATTTTCTGACGACATCGCTGGCCAAACCGCCGCAAGATACCGACCTGCAAAAAGAAATTCAGGATACCGCCCCGCAATCAACCGCACTGGAAAGCGCTCCCCGGCTTGCCGAGCCGGCGATCCAGACAACCGCTCCCCTGATACCGGTTCCGGAAACCGTTGCCAAAGCGCCTGTCGCGCCTTCCAATCCCGCAACGGCGCGTGAAACGCCTGCTTCTCCCACCGATCCTGCCGCCCGCGTCGAGCCCGTTCCGAAGCAGGACCTGCCCTTCGTCAAGACCATCGACAGCGACAACGGGCCCGTGCGCGCCAATGAACGTCGCCCCTCGACAGGCGGCGGCGGCAATGGCCGCACGCCCGATTCCGGCGGCGGCGGCGGTGGCGGCGGCAATCCGAACCAGCAGGGCTTCCACAAGCGTAGCGAACCGGTCAACTTCGCCCGCAGCCTGCAGCAGGCGATGGCCGCCATTCGCCGCAACATGGCGGTGGTGATGATCTTCACCATCGCCATCAACGTGCTGCTGCTGGCGATCCCGATCTATTTGTTCCAGATTTCCGACCGTGTGCTGACCAGCCGCTCGATGGACACGCTGGTCATGTTGACGATCGCCGTCATCGGCGCTGTCCTGCTGCAGGCGTTCATGGATTCGGTGCGCCGCTTCATCCTGATGCGCACGGCAGTAGAACTGGAGGTTCAGCTCGGCGCACCGGTTCTGTCGGCGGCGGCGCGCGCCTCGCTGCACGGCAACGGCAAGGATTACCAGACGCTGCAGGATCTGCAGCAATTGCGTGCCTTCATCACCTCCGGCACGCTGATCGCCTTCCTCGATGCGCCATTGATGCCGCTGTTCATCGTCGTCGTCTACCTGGTGCATCCGCATCTGGGCATCATCATCATGGTGTGCTGCGTCACGCTGTTTCTCATCGCCTGGCTGAACCAGCGCTTCACCGCAAGGCAGTTCTCGGAGGCCAGCGGTTATGCCAGCCGCGCCAATTTCCATCTCGATTCGATGACCCGAAATTCGCAGATCATCAACGCCTTGGCGATGATACCGGAAGCCGTGAGGATGTGGGGGCAGGAAACGGCCGGTTCGTTGAAGGCTCATGTCCAGGCCCAGGATCGCAACATCATCTTTTCGGGTATCTCCAAGGGCTGCCGCATGGTCGCGCAGATCGCCCTGCTCGGCTGGGGCGCGCATTTGTCGCTCGCCGGCGAATTGACCGGTGGGATGGTGATCGCCGCCTCGATCATCTCCGGTCGCGCGCTGGCGCCGATCGAAGGCGCCATCGAGGGCTGGAACCAGTTCAACCGCTCCGCCGCCGCTTATGGCCGCATCAAGCAGTTGCTGCTCGGCTCGCCGCTGAACTTCGCCCGCCTGCGCCTGCCCAACCCGGAAGGACGGCTGGATGTGGAGCGCGTGCTGTTCGTACCGCCGCCGCAGAAGCGCGTGATCCTCAACGGCATTTCCTTCTCGCTGAAGAAAGGCGAGTCGCTGGCGATCATCGGCAATTCCGGTTCCGGCAAGACGACGCTCGGCAAGATGCTGGTCGGCTCGATCATGCCGACCTCGGGCAATGTCCGCCTCGACCTGATGGATCTGCGCAACTGGGACCAGCGTCAGTTCGGCGAAAGCATCGGCTACCTGCCGCAGGACGTGCAGCTTTTCCCGGGTACGATCAAGGCGAACATTTCACGCATGCGCGACGATATCGAGGACCGGCAGATCTTCGAGGCCGCGGTGCTGGCCGAT
PROTEIN sequence
Length: 626
MNYVLRGTVSWQPPMRQDAVRRGGSEGDVMDACIQAINDAVEDFLTTSLAKPPQDTDLQKEIQDTAPQSTALESAPRLAEPAIQTTAPLIPVPETVAKAPVAPSNPATARETPASPTDPAARVEPVPKQDLPFVKTIDSDNGPVRANERRPSTGGGGNGRTPDSGGGGGGGGNPNQQGFHKRSEPVNFARSLQQAMAAIRRNMAVVMIFTIAINVLLLAIPIYLFQISDRVLTSRSMDTLVMLTIAVIGAVLLQAFMDSVRRFILMRTAVELEVQLGAPVLSAAARASLHGNGKDYQTLQDLQQLRAFITSGTLIAFLDAPLMPLFIVVVYLVHPHLGIIIMVCCVTLFLIAWLNQRFTARQFSEASGYASRANFHLDSMTRNSQIINALAMIPEAVRMWGQETAGSLKAHVQAQDRNIIFSGISKGCRMVAQIALLGWGAHLSLAGELTGGMVIAASIISGRALAPIEGAIEGWNQFNRSAAAYGRIKQLLLGSPLNFARLRLPNPEGRLDVERVLFVPPPQKRVILNGISFSLKKGESLAIIGNSGSGKTTLGKMLVGSIMPTSGNVRLDLMDLRNWDQRQFGESIGYLPQDVQLFPGTIKANISRMRDDIEDRQIFEAAVLAD