ggKbase home page

SCNpilot_cont_500_bf_scaffold_6967_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1663..2391)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036CE0AD similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 242.0
  • Bit_score: 265
  • Evalue 5.10e-68
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EUB95538.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 241.0
  • Bit_score: 262
  • Evalue 8.00e-67
Bacteriophytochrome protein similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 232.0
  • Bit_score: 248
  • Evalue 1.60e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGCGCTGGTGCTGCACGAACTCTCCACCAATGCCGCCAAATATGGGGCGCTGTCGATCTCCGGCGGGCGGCTCGACGTCGCCTGGGCGCTGACGGCAGAGAAGGATTGCCGGCTGGAATGGCGCGAAAGCGGCGGCCCGCCGGTCGAGCCGCCAAAGCGCCACGGGTTCGGCACCGTGCTGATCGATCGCAGCGTACCCTACGATCTCGGCGGCGAGAGCGATGTCGCCTATGCCCGCGACGGGTTGCGGGCGCATTTCCTGCTGCCGCGCCGCCATGTCTCGGAAATCGCCGAAAGCGACGCCCTTCCGGCCGCCGACAGGCCGGCGATGGCGGTGACGGCGGGAGACGCGGAATCGCTTGCCGATATCCAGCTTCTGCTGGTCGAGGACCAGATGCTGATCGCGCTCGACGTCGAAAGCATGCTGGCCGACCACGGCATCAGCCGGGTGACGACGACGGGATCGGCCATGGACGCTTTGCATCGCCTCGACGTGCTGATGCCCGATATCGCCGTGCTCGACCTCAATCTTGGCGCGACAACCTCGCTGCCGGTCGCCGAGGAACTGGCGCGGCGGGGCATCCCGTTCCTGTTCGCCACCGGCTATGGCGAAACCTCGATCCTGCCGCCGAGCATGGAGACCGTGCCGGTGGTGCGCAAACCCTATGATGCCGAAGTGCTGATGGCGGCGATCCGGCGCACCCTGAAGCGCGTCGGGAAGCTCTGA
PROTEIN sequence
Length: 243
MALVLHELSTNAAKYGALSISGGRLDVAWALTAEKDCRLEWRESGGPPVEPPKRHGFGTVLIDRSVPYDLGGESDVAYARDGLRAHFLLPRRHVSEIAESDALPAADRPAMAVTAGDAESLADIQLLLVEDQMLIALDVESMLADHGISRVTTTGSAMDALHRLDVLMPDIAVLDLNLGATTSLPVAEELARRGIPFLFATGYGETSILPPSMETVPVVRKPYDAEVLMAAIRRTLKRVGKL*