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SCNpilot_cont_500_bf_scaffold_6741_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 200..1249

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 330.0
  • Bit_score: 621
  • Evalue 7.50e-175
Pseudouridine synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMG9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 330.0
  • Bit_score: 621
  • Evalue 5.30e-175
ribosomal large subunit pseudouridine synthase C similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 330.0
  • Bit_score: 621
  • Evalue 1.70e-175

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGCTCTACAGGGGCAGCAACAAGCGCAGGTTACGCGCAGAAATCGGAAAGGTCGGCATGGCTGGCATCGAGCATATCACCGTCGACGCGGACGAGGCCGGAATGCGGCTGGACCGCTGGTTCAAGATTCATTATCCCGGCCTCGGCTTCGGGCAATTGCAGAAGCTGCTGCGCTCCGGCCAGGTTCGTCTCGATGGCGGCCGGGTCAAGACCGATACGCGTGTCGAGCCGGGGCAGGTGGTGCGCGTGCCGCCGATCGACATCGATCTCAAGGCGGCGAAGAGCGGGCCGATCGCCGGGCGCGAGCTGAAACATTCCGGCGATGCGGAGCTTCTGTCGCGCATGTTGTTGCATGAGGACGACAAGGTCATCGTGCTCAACAAGCCGGCCGGTCTTGCCGTGCAGGGCGGTTCCGGCGTCAACCGGCACATCGATAAAATGCTGGAAGCCTGGACCAGCCAGAAGGGCGAGAAGCCGCGCCTGGTGCATCGCATCGACCGCGACACCTCGGGCGTGCTCGTCGTGGCGCGCACACGCGGCGCGGCGCAGAAGCTGACCGCAGCCTTCCGCGAGCGCGATACCAAGAAGACCTACTGGTCGCTGGTCAAGGGCGTGCCGCGCAAGCACGAGGACCGCATCTCCACCTGGCTGGTGAAGGAACAGACGCCGGACGGCGACCGGATGCGTATCGCCAAGCATGGCGAGGAGGGCGCCGATCACGCCGTCTCCTATTACCGCGTGCTGGAAACGGCGGCGCAACGTCTCGCCTGGCTGGAGATGGAGCCCTATACCGGCCGTACCCACCAGCTTCGCGTCCATGCGCTGCATATGGGCCATCCGATCATCGGCGATCCCAAATATTTTATCGATGATCCCAACTGGGATTTCCCGGGCGGCATCCAGAAGCGGTTGCATCTGCATGCCCGCCATATCGACATACCGCATCCGAATGGCGGGCGCCTGCGTGTCACCGCTCCGCTACCGCCGCATATGGTGCAGAGCTGGAACCTGCTCGGCTTCGACACCGACCGCGTGGGCGAGGACGATTGA
PROTEIN sequence
Length: 350
MLYRGSNKRRLRAEIGKVGMAGIEHITVDADEAGMRLDRWFKIHYPGLGFGQLQKLLRSGQVRLDGGRVKTDTRVEPGQVVRVPPIDIDLKAAKSGPIAGRELKHSGDAELLSRMLLHEDDKVIVLNKPAGLAVQGGSGVNRHIDKMLEAWTSQKGEKPRLVHRIDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYWSLVKGVPRKHEDRISTWLVKEQTPDGDRMRIAKHGEEGADHAVSYYRVLETAAQRLAWLEMEPYTGRTHQLRVHALHMGHPIIGDPKYFIDDPNWDFPGGIQKRLHLHARHIDIPHPNGGRLRVTAPLPPHMVQSWNLLGFDTDRVGEDD*