ggKbase home page

SCNpilot_cont_500_bf_scaffold_6061_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1280..2236

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A62D9 similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 315.0
  • Bit_score: 359
  • Evalue 4.50e-96
  • rbh
Integrase {ECO:0000313|EMBL:KGE81747.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 313.0
  • Bit_score: 393
  • Evalue 3.90e-106
putative phage integrase similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 313.0
  • Bit_score: 342
  • Evalue 1.80e-91
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGCCATTGGTACTTTGGAAACGAGGGAAATATTGGCATTACCGGGGCACAATCGCCGGAAAGCGTTTGAGGGCCAGCACGAACGCTGAAAAGCGATCTGACGCAGCAAAAATCGCAATGCGCATTCAGACGAAAGTTTGGCAAGAATATGTAGATGGACCCCGAGCAACTTTGACGTTTGCCGACGCTGCGCAGGCCTATCGCCTGGCGGGTAAATCCACCCGCTTTCTCGACACCCTTGAGGCGCACTGGGGCGATATTCGAGTGATGGACATCACGGCAGGTGCCATAATTGCTGCCGCGAACAAAATATATCCGAAAGCGCAGAACAGCACAAAAAACCGCCACGTTATCGGGCCGACCCAAGCCGTCATAAACCACGCGGCCGAAATGGGGCTGTGCAATTCGATCCGCGTTCGTCGGCTGAAAGAAGCGGTAAAGGTCAAGAAGCCAGTGACGATTGAATGGCTGCGGGCCTTCATGGATCAGGCCAACCCGCATTTGGGCGCGCTGGCATGCTTCATGTTTCTCACCGGCGCCCGGATCAGCGAAGCGATCGATGTTAGGTGGAGAGATGTGGATTTTGAAGCGCGGCGCGTCTTGATCAGGCAGTCGAAGATTTCCGAGGAGCGCCTCGCTCACATGCCGGCAATGCTGATTGTCGCCATGTCGAACATCCAGAGCAACCGGGAGCCAAGCGAGAAGGTATTTAAATATTCCTCGCGCTTCACTGCCGAGCCGCAATGGCAAAAGGCAATAGAGCGCGCCGGGCTGGAATACCTATCGTTCCACTGCTGCCGTCACGGGTTCGCGACCGCTCTCTTGCACAAAGGCGTTGACCCGGTCACAGTGGCAAAATTAGGCGGCTGGGCATCGACGCAGCACGTTTTCAAAACTTACGGCCACGCGATGAAAGACGACCGCCTCACGGACATTATTGTGAGCGATGCCATATGA
PROTEIN sequence
Length: 319
MPLVLWKRGKYWHYRGTIAGKRLRASTNAEKRSDAAKIAMRIQTKVWQEYVDGPRATLTFADAAQAYRLAGKSTRFLDTLEAHWGDIRVMDITAGAIIAAANKIYPKAQNSTKNRHVIGPTQAVINHAAEMGLCNSIRVRRLKEAVKVKKPVTIEWLRAFMDQANPHLGALACFMFLTGARISEAIDVRWRDVDFEARRVLIRQSKISEERLAHMPAMLIVAMSNIQSNREPSEKVFKYSSRFTAEPQWQKAIERAGLEYLSFHCCRHGFATALLHKGVDPVTVAKLGGWASTQHVFKTYGHAMKDDRLTDIIVSDAI*