ggKbase home page

SCNpilot_cont_500_bf_scaffold_8111_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1..1398

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PEG6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 454.0
  • Bit_score: 668
  • Evalue 3.90e-189
Chemoreceptor McpA {ECO:0000313|EMBL:EYR82171.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 466.0
  • Bit_score: 705
  • Evalue 4.00e-200
mcpA; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 459.0
  • Bit_score: 630
  • Evalue 4.80e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ACCGAACTGGCCGGCAAGCCGGTGCTGGTCAACTTCATTCCGGTGCATAACCTGCCGGTCGAAGGCTGGTATCTCTGCGTCATCGTGGATCGCGACATGGCCTATGCCGCCGTCGGCGAATTCCGCATCGCCGCCACCATCGCCACCGTCGTCGGCGTCGTCGCCATGGTCGGCGTGCTCGCCGTGCTGCTGTCGAACATGGTCGTCCGCCCGGTCGTGCGCATGACCGGCATGATGAGCAAGCTGGCGCGCGGCGATGTTTCCGAGGAAATTCCCGAAGCGCACCGCACCGACGAGATCGGCCAGATGGCCGCCGCCGTCGCCGTGTTCCGCGACAATATCGTCGAGCGCGGCCGCCTGACCCGCCAGGCCGAGGAAAACCAGGCGCTGACCGAGCGCGAACGCCAGGAGCGCGAGGCGCTGAAGGCGCGCGAGGCGGAAACCGTGGCCTTTGCCACCCACACGCTGGCCGATGCGCTGGGCCGCCTCGCCGATGGCGACCTCGTCTACCGCATCGAAACGCCCTTCGCCGGCGATCTCGACCGGCTGCGCCTCGATTACAACGGCTCCGTCTCCAAGCTGAACAAGGCGCTCAACACCGTGGCGCAGAAGGCGATGGCCATCGATGGCGGCGCCAACGAGATCCGCACCTCCGCCGACCAGCTGGCGCGGCGCACCGAGCAGCAGGCGGCCTCCGTCGAGGAGACCGCCGCCGCGCTGGAAGAGATCACCACGACCGTCAAGGACAGCGCGCGGCGCGCCGAGGAGGCCGGCAATCTCGTCACCCGCACCCGCGCCGGCGCCGAACAGTCCGGCGAGATCGTTCAGCGTGCCGTCGGCGCCATGCAGGGCATCGAGAAATCCTCCGACGAGATCTCCAACATCATCGGCGTCATCGACGACATCGCCTTCCAGACCAATCTTCTGGCTTTGAATGCCGGCGTCGAGGCGGCGCGCGCGGGCGAAGCCGGCAAGGGATTTGCCGTCGTCGCCCAGGAAGTGCGCGAGCTGGCGCAGCGCTCGGCCAAGGCCGCCAAGGAGATCAAGGCGCTGATCACCACCTCCGGCGACCAGGTGCGCGCCGGCGTCGATCTGGTCAACCAGACTGGCAAGGCGCTGGACGTCATCGTGCGCGAGGTGCAGGAGATCAATGCCCATGTCCACGCCATCGTCACCGCGACGCGCGAGCAGGCGACGGGGCTGCAGGAGATCAACACCGCCGTCAACACCATGGACCAGGGCACCCAGCAGAACGCCGCCATGGTCGAGGAACAGACCGCCGCCAGCCACGGCCTCGCCGGCGAGGCGGCTGAGCTTGCCGCCCTGCTCGCCCAGTTCCGCCTGGACGGCGCACCGGCTTCGCCCCGGCAGACGCGCAACATCGCCTACGCGGCCTGA
PROTEIN sequence
Length: 466
TELAGKPVLVNFIPVHNLPVEGWYLCVIVDRDMAYAAVGEFRIAATIATVVGVVAMVGVLAVLLSNMVVRPVVRMTGMMSKLARGDVSEEIPEAHRTDEIGQMAAAVAVFRDNIVERGRLTRQAEENQALTERERQEREALKAREAETVAFATHTLADALGRLADGDLVYRIETPFAGDLDRLRLDYNGSVSKLNKALNTVAQKAMAIDGGANEIRTSADQLARRTEQQAASVEETAAALEEITTTVKDSARRAEEAGNLVTRTRAGAEQSGEIVQRAVGAMQGIEKSSDEISNIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKALITTSGDQVRAGVDLVNQTGKALDVIVREVQEINAHVHAIVTATREQATGLQEINTAVNTMDQGTQQNAAMVEEQTAASHGLAGEAAELAALLAQFRLDGAPASPRQTRNIAYAA*