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SCNpilot_cont_500_bf_scaffold_7480_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 5479..6075

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, TetR family n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UDF8_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 198.0
  • Bit_score: 357
  • Evalue 1.10e-95
  • rbh
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:EYR78755.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 197.0
  • Bit_score: 364
  • Evalue 7.20e-98
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 198.0
  • Bit_score: 340
  • Evalue 4.20e-91

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGCACGCACACGCGCAGTCGATTTCGAGGAAAAACAGCGTGGCATTCTGGCGAGTGCCGCGGCGGTGTTCGCCGAGATAGGCATGGAGAAGGCGTCCATGTCGATGATCGCCTCGCACAGCAATGTCTCCAAGGCGCTGCTTTACCATTATTATCCGAGCAAGGACGCGCTGATCTTCGACATCGTGCGCACGCATCTCACGGAACTGCAAGGGGCCATCGAAGCCGCCGACAGGCTGGACCTTGCACCGCAGGAGCGGCTGCGCCTGCTGGTGAAGGCCGTGCTCGCCAATTACGAGGGGCGCGACAACGAGCACAAGGTGCAGCTCAACGGCACCAGCGCGCTTTCGCCCGAGCAGCTTTCCGAATTGCAGGCGATCGAGCGACAGATCGTCAAGCGCTTCTCCGGCGTTATCCGCGATATCAACCCGGATCTCGCCGGGGAACGGCCATTGCTGATGCCCGTCACCATGTCGCTGTTCGGCATGATGAACTGGGTTTATATGTGGTTTCGCCCGAACGGGCCGATCACCCGCGACGAATATGCCGATATCGCCACCACATTCATCCTCGAAGGCGTCAAGGCGGTCCGGTAA
PROTEIN sequence
Length: 199
MARTRAVDFEEKQRGILASAAAVFAEIGMEKASMSMIASHSNVSKALLYHYYPSKDALIFDIVRTHLTELQGAIEAADRLDLAPQERLRLLVKAVLANYEGRDNEHKVQLNGTSALSPEQLSELQAIERQIVKRFSGVIRDINPDLAGERPLLMPVTMSLFGMMNWVYMWFRPNGPITRDEYADIATTFILEGVKAVR*