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SCNpilot_cont_500_bf_scaffold_7587_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(6604..7605)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily (MFS) transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQE3_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 289.0
  • Bit_score: 441
  • Evalue 5.50e-121
major facilitator superfamily (MFS) transporter similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 289.0
  • Bit_score: 441
  • Evalue 1.70e-121
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJK79769.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 289.0
  • Bit_score: 441
  • Evalue 7.70e-121

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
GTGACGGGCATTCTCGTGGACGATATCTGGTGGGTCGCCTTGCGCGCCATCACCGGTTTCGCCACCGCCGGCACCTCGATGATCATCGAAAGCTGGCTGAACGAGCGCGCCACCAACAAGTCGCGCGGCATGATCTTCTCGCTTTATATCGGCATCACCCTGATCGGTTCGGTGGGCGGCCAGCTCGTCGTGCCCTTCGCCGATGTCATGACGCCGATCCTGTTCATGGTCTGCGGCATCTTCTATTGCGTTGCCATGCTGCCGACGACGCTCTCGACCGCCGCCTCGCCGCAGCCGCTCAACACGGTCAAGCTCGACCTGCCGGCGCTGTCTCGCAATTCGCCCGTTTCCTTCCTGGGCATTCTGCTGGTCGGCATCGCCAACGGCGCCTTCGGCACGCTCGGCCCCGTCTTCGGCGCCGCAGCCGGTTTCGAGCAGGGCACTATCGCCGTCATGATGAGCGTCGCCATCATGTCCGGGGCGCTGATGCAGCTTCCGGCGGGGCGGATGTCCGACCGAATGGACCGGCGCTACGTGCTGGCCGGCCTCTCCGGCGTCGCAGCCCTTTCAGGGCTGCTGTTCTTCGTGCTGACGCCCTTCGATGTCGTGTGGCTGCTGGTGCTGGTCGGCATCTACGGCGCAGCCGCCAATGCGCTGTATCCGATCGCCGTCGCCCATGCCACCGATTTCGCCTCGCCGGAGGATTTCGTCAAGGTTTCCGGCGGTCTGCTGTTGCTCTACGGCGTCGGCACCATCATCGGCCCGACGCTGGGCGGCCCGATCATGTCGGCCTTCGGTCCCTATGCCCTGTTCGGGGTAACGGCCATGGCCCATATCCTGATCACCGCCTATGCCATCATCCGCACGCCTTCACCACGACAGGCCCGATGGCGACGCCTGAAAGCCTGTCGCTCAGTCCGCGCGCAGCGCCGCTGCCCGAAGGTGATTCCGCCGAAGAACAATATCCGAGGGCTGCGATATGAACGGAATCGACGACGATAA
PROTEIN sequence
Length: 334
VTGILVDDIWWVALRAITGFATAGTSMIIESWLNERATNKSRGMIFSLYIGITLIGSVGGQLVVPFADVMTPILFMVCGIFYCVAMLPTTLSTAASPQPLNTVKLDLPALSRNSPVSFLGILLVGIANGAFGTLGPVFGAAAGFEQGTIAVMMSVAIMSGALMQLPAGRMSDRMDRRYVLAGLSGVAALSGLLFFVLTPFDVVWLLVLVGIYGAAANALYPIAVAHATDFASPEDFVKVSGGLLLLYGVGTIIGPTLGGPIMSAFGPYALFGVTAMAHILITAYAIIRTPSPRQARWRRLKACRSVRAQRRCPKVIPPKNNIRGLRYERNRRR*