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SCNpilot_cont_500_bf_scaffold_7843_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 4733..5236

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JGH9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 161.0
  • Bit_score: 203
  • Evalue 2.20e-49
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EMG51363.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 161.0
  • Bit_score: 203
  • Evalue 3.00e-49
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 132
  • Evalue 1.50e-28

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Taxonomy

Ochrobactrum sp. CDB2 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGTCGACATAGTGACAAGCAGATCCGACGAAATCGAGAGGCTTTATCAGACCGAGCGCCGCCGGCTTGAGCGCATGGTCACGCGCAAGGTCGGCCCGTCGCAGGCGTCCGACGTGGTCCAGGAGGTCTTCGCGCGGATCTGGGAGAAGGCCAAGGAACATGTCGTGCTGACGCCCTCCTATCTGAGCCGCTGCGCAAGCAACTCGGCAATCGATCAGCTGCGCGTCGAGAAGCGTCACAAGGCCCTGGCCGAGAAGATCACCGCCGCTCAATATGCCGCGCCAGTCGCAACGCCGCTCCAGATCGTCGAAGCCAAGGATGGCATCCGTCACATTGATGACACCATCCGGCGTCTGCCGGAGCGTACCCGCCACGTTTTCCTGCTGAACCGCGTTCATGGTTGCACCTATCAGGAAATTGCTGCCACGATGGGCCTCAGCTACATCATGGTAGAGCGCGAGATAGCGAAAGCCCTGCTTGCCTGCCGGGAAAGCTTCAAATAA
PROTEIN sequence
Length: 168
MVDIVTSRSDEIERLYQTERRRLERMVTRKVGPSQASDVVQEVFARIWEKAKEHVVLTPSYLSRCASNSAIDQLRVEKRHKALAEKITAAQYAAPVATPLQIVEAKDGIRHIDDTIRRLPERTRHVFLLNRVHGCTYQEIAATMGLSYIMVEREIAKALLACRESFK*