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SCNpilot_cont_500_bf_scaffold_8621_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3..1118

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B63639 similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 365.0
  • Bit_score: 300
  • Evalue 2.90e-78
O-antigen export protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 365.0
  • Bit_score: 281
  • Evalue 4.40e-73
Possible membrane protein involved in export of O-antigen {ECO:0000313|EMBL:CAE30029.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 365.0
  • Bit_score: 281
  • Evalue 1.90e-72

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
GAGCCCTTCGTCCTGCGCATCTGGAACGAAATGAAGGTAAACGCGGACGCCCCACGTCTCAAAGGCGCGTTGCTATTCACCTTCGTCGCCTCCGTTTGCGGCCCGCTGATCGCGACGGCGATCTTCTATCCCTGGGCACTCACCTATGTCGGCCATGGCACGGCGCTGGCGACGCTTGCCTATCTCGTGATTTCGTCGCCGTTGCAGATCTGCATCCATCTGGTGCGTACCGAACGCGGCACCGTCTATGGCGATGGCCTGAGTTTCGCGATCGTCGGCCTCCCGCCCATCGTCTATCTCGGCATGTGCCTCGTCAACGGCACGCCAGCAGACATCGCCGATATTTTCACCGTGCTCGCCTGCGGCGCCTTCGTGGCGCTGCTGGCGCAGCTCGTCATGATCCGGCGCCGCATCCTCGCGCTTTTTCCCGATTTCCGGACGGTGCGCGCCATCATCGAGTTTCGCCAATGGCTTCCGCGCTCGGGCAAGCTCTGGATGACCGCTTCGCTCGAAGCGACCAACCAGTATATCGACGTGATCATCATCGGTTTCCTGATGGATCCGACGGTCGCCGGCGCCTATTTCGTCACCGTCCGCTTCGCCAACCTGTTTGCCGCAGCCGCCGACGCCGTCAACCTGTTCGCCACCCAGCACCTGCCCGCGCTCTACTACCGCGACGAGCGCGCGGCGCTCGCCAAGATGCTCGACAATCTCGCCTGGATCATGGCCTTCTTCACCGGCATGGGCCTTCTCGGCATCACTGCCGGCGGCTATCTGGCGCTATGGGTCATCAACGAGAACTACACCCAATATTACCCGCAATTGCTGATCCTGTGCCTGGGAACGGCAGCCGCCGGGACGACGCGGGCATCGACGCTGGCGCTGATGCTGTCAGGTCATGAAGGCCGCTATCTGCTGATCACCGCCATGGGCGTGTTGCTGCGCTGCCTCGCCTTGTTCGCTCTCGTCCCGCATTTCGGGATTACCGGGGCGGTCATCGCCAGCACCCTCATCTATGCCATCCAGGCCGTTGCCTTCCGTCGGGCCGACAAGGCGCTGACAGGCCTGGACGCCTCGATGTTCCGGCTGCTGCGCAAGCGGCCGGTGCCCGAATGA
PROTEIN sequence
Length: 372
EPFVLRIWNEMKVNADAPRLKGALLFTFVASVCGPLIATAIFYPWALTYVGHGTALATLAYLVISSPLQICIHLVRTERGTVYGDGLSFAIVGLPPIVYLGMCLVNGTPADIADIFTVLACGAFVALLAQLVMIRRRILALFPDFRTVRAIIEFRQWLPRSGKLWMTASLEATNQYIDVIIIGFLMDPTVAGAYFVTVRFANLFAAAADAVNLFATQHLPALYYRDERAALAKMLDNLAWIMAFFTGMGLLGITAGGYLALWVINENYTQYYPQLLILCLGTAAAGTTRASTLALMLSGHEGRYLLITAMGVLLRCLALFALVPHFGITGAVIASTLIYAIQAVAFRRADKALTGLDASMFRLLRKRPVPE*