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SCNpilot_cont_500_bf_scaffold_8498_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1983..3197)

Top 3 Functional Annotations

Value Algorithm Source
Replication protein A n=2 Tax=Agrobacterium RepID=Q7CTM7_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 404.0
  • Bit_score: 680
  • Evalue 1.10e-192
  • rbh
Plasmid partitioning protein RepA {ECO:0000313|EMBL:CDN94859.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 404.0
  • Bit_score: 681
  • Evalue 7.00e-193
repA; replication protein A similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 404.0
  • Bit_score: 680
  • Evalue 3.50e-193
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGACGAGCGCAACCGAGAAAAAAATGGCCATGCCGGGACCGGACCTCAGGGGTCTGATCCAGAGCCATTCCGCGTCGCTCTCCAGCCAGCTCCAGGCCCACCACCTCACGACCTTCCCGCCGCATTCCGACAAGGTGATCCGCAGCTTTTCGCCGGCCGAGACGGCCAGGCTGGTCGGCATTGCCGAGGGTTATCTAAGGCAGGTGGCGGCGGAAATGCCGCAGCTTTCCGCCAGCAGCCGGGGCGGCCGCCGTGCCTATAGCGTCGAAGACATCAGCGAATTGCGCAAGCATCTCGACCAGGGCAGCCGTGGTGCGCGCCGCTACCTGCCGCATCGGCGCGGCGACGAGGCGCTTCAGGTCATCGCTGTGATGAATTTCAAGGGCGGTTCCGGCAAGACGACGACGGCGGCGCATATGGCGCAATATCTGGCGCTGCGCGGTTACCGGGTGCTGGCCATCGATCTCGATCCGCAGGCCAGCATGTCGGCGCTGTTCGGCCACCAGCCGGAAATCGATGTCGGCCCGAATGAAACCCTCTATGGCGCGATCCGTTACGACGACGAGCAGCGGCCGATCGCCGAAGTCGTCCGCTCCACCTATATTCCCGATCTGCATCTCATTCCCGGCAATCTGGAACTGATGGAATTCGAGCACGATACGCCGCGCGCCCTGATGAAGCGCCAGCCGGGCGATACGCTGTTCTTCGCCCGCATCGGCCAGGCGATCGCGCAGGCGCAGAACCTCTACGATGTCGTGGTCATCGATTGCCCGCCGCAACTCGGCTATCTCACGCTTTCGGCGCTGACGGCGGCGACCTCCGTACTGGTCACCGTGCATCCGCAAATGCTCGACGTCATGTCGATGAACCAGTTCCTGGCGATGACCGGCGACCTGCTGGAAGAGATCTCGGCGGCGGGCGCGCGCACCGAATACAAGTGGATGCGTTATCTCGTCACCCGCTTCGAGCCCAGCGACGGTCCGCAGAACCAGATGGTCGCCTTCCTGCGCTCGATCTTCGGCGAGCATGTGATGATCCATCCGATGCTGAAATCGACGGCGATTTCCGATGCCGGCCTCACCAACCAGACGCTGTTCGAGGTCGAGCGCAGCCAGTTCACCCGCGCCACCTATGACCGGGCGCTGGAATCGATCAACAATGTCAACGCGGAAATCGAAGGCCTGATCAAGAAGGCCTGGGGCAGGGCGGCATGA
PROTEIN sequence
Length: 405
MTSATEKKMAMPGPDLRGLIQSHSASLSSQLQAHHLTTFPPHSDKVIRSFSPAETARLVGIAEGYLRQVAAEMPQLSASSRGGRRAYSVEDISELRKHLDQGSRGARRYLPHRRGDEALQVIAVMNFKGGSGKTTTAAHMAQYLALRGYRVLAIDLDPQASMSALFGHQPEIDVGPNETLYGAIRYDDEQRPIAEVVRSTYIPDLHLIPGNLELMEFEHDTPRALMKRQPGDTLFFARIGQAIAQAQNLYDVVVIDCPPQLGYLTLSALTAATSVLVTVHPQMLDVMSMNQFLAMTGDLLEEISAAGARTEYKWMRYLVTRFEPSDGPQNQMVAFLRSIFGEHVMIHPMLKSTAISDAGLTNQTLFEVERSQFTRATYDRALESINNVNAEIEGLIKKAWGRAA*