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SCNpilot_cont_500_bf_scaffold_8501_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..445)

Top 3 Functional Annotations

Value Algorithm Source
Transporter protein RarD n=2 Tax=Rhizobium etli RepID=S5S1P7_RHIET similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 149.0
  • Bit_score: 222
  • Evalue 2.30e-55
Transporter protein RarD {ECO:0000313|EMBL:AJC78664.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 149.0
  • Bit_score: 224
  • Evalue 8.60e-56
rarD; transporter protein RarD similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 149.0
  • Bit_score: 222
  • Evalue 7.30e-56

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGTCAGTCGAATCGGCGCCTGTGCGCGAAAACGTCGACAGCGCGAGAGGCTTCGCCTTCGCGCTTGCGGCTTATGTCCTGTGGGGGTTCCTGCCTTTCTACATGAAGGCGGTGGCGCATATCCCGCCGGCCGAGGTCATCGCCCATCGCATCGTCTGGTCGGTGCCGGTCGCCGGCGCCGTGCTTGTGGCGCTGGGGCGCACCGGCGACGTCAAGATGGCGCTGCGCACACCGCGCATGATGGCCATGGCGACGCTGACGGCGGCGCTGATCACCGTCAACTGGGGCATCTATGTCTGGGCGATCGGCGTCGGGCGAACGCTTGACACCGCGCTGGGCTATTTCATCAATCCACTGTTTTCCATCCTGCTCGGGGCGGTGCTGCTGCGCGAGAAGCTGAGCCTCGGGCAGAAGGCGGCAATCGGGCTGGCCGCGCTCGGCGTT
PROTEIN sequence
Length: 148
MSVESAPVRENVDSARGFAFALAAYVLWGFLPFYMKAVAHIPPAEVIAHRIVWSVPVAGAVLVALGRTGDVKMALRTPRMMAMATLTAALITVNWGIYVWAIGVGRTLDTALGYFINPLFSILLGAVLLREKLSLGQKAAIGLAALGV