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SCNpilot_cont_500_bf_scaffold_11429_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3844..4761

Top 3 Functional Annotations

Value Algorithm Source
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAW8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 296.0
  • Bit_score: 435
  • Evalue 4.70e-119
  • rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR83406.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 296.0
  • Bit_score: 435
  • Evalue 6.60e-119
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 290.0
  • Bit_score: 404
  • Evalue 3.70e-110
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGAGTGCCGAATTCAGACGCCTGCCGCCGCTCAACGGATTGCGGGTTTTCGAGGTCGTCAGCCGCCATCTCAATTTCCGGCTGGCGGCCGAGGAACTCGGCGTCACGCAAGGGGCGGTCGCGCAACAGATCCGCGGCCTCGAAGCCGAACTCGGCCAGAAACTCTTCGATCGCGGCCCGCGCAGCCTGGCGCCGACCGATGCGGGGCGCAGTTATGCCGCCAATATCCGGCGCGCCTTCGAACTAATTGCCGAGGCGACGGAGGCATTGCGTCCGGAACCGAAACATTTGACCATCAGCGTCACGCCGAGCTTCGCCTCGAAATGGCTGATCCCGCGCCTGCCCGCCTTCACCGCCGCCCATCCCGATATCGACCTGCGCATTCTCGCCAGTGAGCGCATGGCGAATTTCCAGGCCGACGCGGTGGATCTCGCAGTGCGTTACGGGCGACCGCCCTTCGGGCCGGGCCTGACCGCGACGCTGCTGTTCGAGCAGGTGCTGGTCGCCGTCGCCAGTCCCTTGCTGGTCGAGAGGCTCGGGGAATTCGATGCGCCGGGCGGGCAGGTTAACTATCCGCTGCTGCACGACGCCCATGATATCTGGCCGCAATTCCTCGAAAAGGCGTGGCCGGATGCCCGGCCGGCCGCGGCCAAGAACATGCGGTTCAACCAGACGACGCTTGCCATCGATGCGGCGATTGCCGGGCAGGGGGCGGCGCTCGCCAGCCTGCTTTTCGTGCGCGACGATATCGAGGCCGGGCGGCTGGTGCGCTTGTCCACGACGGATCTGAAGGTCGATACCGATTTCTATCTCGTCCATCCCCGCAAGCCACGCCATGCCGAAAGCCTCGATCTGGTCAAATCCTGGTTTATTGCGGCCACCGCTAACCCGCCTTCGATGCCGGCGTCGCCGTCCTGA
PROTEIN sequence
Length: 306
MSAEFRRLPPLNGLRVFEVVSRHLNFRLAAEELGVTQGAVAQQIRGLEAELGQKLFDRGPRSLAPTDAGRSYAANIRRAFELIAEATEALRPEPKHLTISVTPSFASKWLIPRLPAFTAAHPDIDLRILASERMANFQADAVDLAVRYGRPPFGPGLTATLLFEQVLVAVASPLLVERLGEFDAPGGQVNYPLLHDAHDIWPQFLEKAWPDARPAAAKNMRFNQTTLAIDAAIAGQGAALASLLFVRDDIEAGRLVRLSTTDLKVDTDFYLVHPRKPRHAESLDLVKSWFIAATANPPSMPASPS*