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SCNpilot_cont_500_bf_scaffold_13705_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3694..4590)

Top 3 Functional Annotations

Value Algorithm Source
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3H8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 298.0
  • Bit_score: 300
  • Evalue 1.40e-78
  • rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR79553.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 298.0
  • Bit_score: 300
  • Evalue 1.90e-78
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 294.0
  • Bit_score: 285
  • Evalue 1.40e-74

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAAACGCGGACGCCTGCCGCTGACGGCCCTGCGCAGCTTCGAGGCCGCCGGCCGGCTGGAAAGCATCACGCTTGCCGCCGAGGAGCTTTTCGTGTCGCAGGCGGCGGTCAGCCGGCAGATCCGCGGGCTGGAAGATCAACTCGGCAAGGCCCTGTTCGAGCGCCATCACCGCGCGATCAAACTGACGCCGGCCGGCCGCGACCTGCTCGACGTGCTCGTCGCCTGTTTCGACCGGATGGAAGGCGCGGTGCAGGCGGCGGCGCTGACGCCGATGACGCGGGCGCTGGTGCGCATCAGCGTCGAGCCTTCCTTTGCCGCCGGGCGGCTGCTGCCGGCGCTGCCGCAATTCAATGCGCAGCACCCCGATATCGACGTGCAGGTCGACTCCGATCCGCGCCTCGTCAGCTTTCGCGGCAACGGGCCGGTACTGGCGGTGCGCTATGCGCCGGCGGCGCGGAACTGGCCGAAAACGCAGGCGCGACTGCTTTACGAATGCGAGATGGCGGTGGTCGCCGCGCCCTCCCTGCTGGCCGAACAGGGAATGCCGCGAGAACCCGCCGAGTTGCTCGATCTTCCGCTGGTGCATGAGGAAAACCGCGACCTGTGGAAGCGCTGGCTGGCGGCGGCGGGCCTTCCGGATACGGGCAGCGAACGCGGCCCGATCTTCGACGATGCCGCGCTCGTGCTGCAATCGGCGCTGCGCGGCCAGGGCGTCGCGATCGTCGATCTCACCATGGCGCGGGAAGATCTCCTGACCGGCCGGATCGTGCGGCTTTTCGAGCCGGTGCTGGTCCACGGCGCCTATTTTCTCGTCGCCGGCGATTTCCAGCGGCTGGCGCCGGCGGCGCGGCAACTGGCCGACTGGCTCTCCACAGCCTTCGCCGCAAGCCCATAG
PROTEIN sequence
Length: 299
MKRGRLPLTALRSFEAAGRLESITLAAEELFVSQAAVSRQIRGLEDQLGKALFERHHRAIKLTPAGRDLLDVLVACFDRMEGAVQAAALTPMTRALVRISVEPSFAAGRLLPALPQFNAQHPDIDVQVDSDPRLVSFRGNGPVLAVRYAPAARNWPKTQARLLYECEMAVVAAPSLLAEQGMPREPAELLDLPLVHEENRDLWKRWLAAAGLPDTGSERGPIFDDAALVLQSALRGQGVAIVDLTMAREDLLTGRIVRLFEPVLVHGAYFLVAGDFQRLAPAARQLADWLSTAFAASP*