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SCNpilot_cont_500_bf_scaffold_14158_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..1744)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWX7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 581.0
  • Bit_score: 858
  • Evalue 4.30e-246
  • rbh
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:EYR83995.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 581.0
  • Bit_score: 858
  • Evalue 6.00e-246
hypothetical protein; K11896 type VI secretion system protein ImpG similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 588.0
  • Bit_score: 589
  • Evalue 8.90e-166

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGTCCGACGATCTCCTGACGCATTACAACAGGGAATTGCTATATATCCGCCGCGCGGCGGCTGCCTTCGCCAACGAGAATCCGCGCATCGCCGGGCGCTTGCGCCTGTCGGAGGATGCGATCGAGGATCCGCATGTCGGCCGCCTGATCGAAGCCTTCGCCTACCTGACCGCCCGTGTGCGCCAGAAACTCGACGACGATTTTCCCGAGCTGACCAATGCCCTGCTCGGCATCCTCTATCCGCATCTCGACCGGCCGATCCCGTCGATGTCGATCCTGCAGATGGACGCCAAGCCCGAACTCGTCGAGGCCTACCGGGTGCCGGCGGGAACGCTTCTCGATACCGAGGCCGTCAACGGCGAGCGCTGCCGGTTCCGCACCGCTTTCGACGTGTCGCTGTCGCCGGTGACGGTGCGCAACGCCACGCTGTCGGGGCGGCCGATCACCGCGCCGGAATGCGCCGGCGCCGCCAATGCCGCCGGCTGCCTGCGCCTGACCCTCGACGTGACCGCACCGGAAGGCGGCTTCGGGCAGCATTCGCCCGCCTCGCTGCGTTTCTTCCTGCGCGGCCAGCCGCAACTGGTCTATCCACTCTACGAATTGCTGCTCAACGATGTCAGCGCCATCGCCTTTGCGGAAGGCGCGAACGATCCGTCGCCGGTCTTCCTGCCGGGTTCGGCGGTGACGGCGGCCGGCTTTGCCGAAAACGAGGGCCTGCTGCCCTATGCGCAGAATTCGCATCCCGCCTATCGCATCCTCACCGAATATTTCGCCTTTCCGGAAAAATTCCTGTTCGTCGACCTGAAGCTGCCGGAGCGCGCGCTGCTTTCCGCCAAGGGCCGCACGCTCGACGTCTTCCTCTATCTCGACCGGGCGCAGCCGGGGCTGGAGCGTTCGCTCAACGCCAGCGCCTTCGCGCTCGGCTGCACGCCGGTCGTCAACCTGTTTCCGCAGACGGCCGAGCCGATCACGCTGGACCAGCGCAGCTTCGACTACCGCGTCGTGCCCGATAGCGGCCGGCCGCAGGCGCTGGAGGTCTACAGCGTCGAGGCGGTGCGCGGCATCGATGCCGACGGCAGGCAGCGGCTCGTCCACCCGTTCTACAGCGTCGAGCACGCCACCAGCGCCGAATGGGTGAAGGCCGACGAGCGCGATCTCGCCTGGTGGCTGTCGCGGCGCGAACCTGCGAGCAGCGACAACCCCGGCAGCGAAGTGTTCCTGTCGCTCTCCGACCCGGATTTCCGGCCGCAGCTGCCCTCGTCCGAGGTGCTGCTGGTCGATACGCTCTGCCTCAACCGCAACCTGCCGGAGCGCCTGCCCTTCGGCGGCGGCCAGCCGCATCTGCGCATGACCGAGCCGGTGCCGATGGTCGGAGCCATGCGCCTGCTGACCGCGCCAACGCCGACGATGCGGCCGATGTTCGGGCATGGCGGCCGCTGGCGGCTGGTGTCGCATCTCGCCCTCAACCACCTGTCGCTGGTCTCGGATGGCGGCGCGCAAGCCCTGCGCGAAACCCTGCTGCTCTACGATTTTCGCGAATCGGCCGAGACGCGCGCGCTCATCGACGGCATCACCCAGCTTTCGTCGAAAAGCGGCACGGCGCGGGTGCGCGCCAAGGGGCAGAGCGTCTTCTGCCGCGGCGTCGATGTCGACCTCTCGCTCGACGAGGCGAATTTCTCCGGCAACGGCGTCTTCCTGATGGCGAGCGTGCTGGAACGGTTCTTCGGGCTTTACGCCAGCGTC
PROTEIN sequence
Length: 581
MSDDLLTHYNRELLYIRRAAAAFANENPRIAGRLRLSEDAIEDPHVGRLIEAFAYLTARVRQKLDDDFPELTNALLGILYPHLDRPIPSMSILQMDAKPELVEAYRVPAGTLLDTEAVNGERCRFRTAFDVSLSPVTVRNATLSGRPITAPECAGAANAAGCLRLTLDVTAPEGGFGQHSPASLRFFLRGQPQLVYPLYELLLNDVSAIAFAEGANDPSPVFLPGSAVTAAGFAENEGLLPYAQNSHPAYRILTEYFAFPEKFLFVDLKLPERALLSAKGRTLDVFLYLDRAQPGLERSLNASAFALGCTPVVNLFPQTAEPITLDQRSFDYRVVPDSGRPQALEVYSVEAVRGIDADGRQRLVHPFYSVEHATSAEWVKADERDLAWWLSRREPASSDNPGSEVFLSLSDPDFRPQLPSSEVLLVDTLCLNRNLPERLPFGGGQPHLRMTEPVPMVGAMRLLTAPTPTMRPMFGHGGRWRLVSHLALNHLSLVSDGGAQALRETLLLYDFRESAETRALIDGITQLSSKSGTARVRAKGQSVFCRGVDVDLSLDEANFSGNGVFLMASVLERFFGLYASV