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SCNpilot_cont_500_bf_scaffold_14158_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3072..5189)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003817D21 similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 592.0
  • Bit_score: 294
  • Evalue 2.30e-76
Type VI secretion protein IcmF {ECO:0000313|EMBL:EYR83994.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 581.0
  • Bit_score: 572
  • Evalue 8.00e-160
type VI secretion protein IcmF similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 575.0
  • Bit_score: 243
  • Evalue 2.50e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2118
GTGAGGGCGCGCCGGGCGATCAGGCGATTCTGGACCTTTCTGAAGCGGCCGTCGGTCTGGCTGTCGCTCGGCGTCCTGATCCTCGCTTTGCTCGTCTGGTTCGTCGGCCCGGCCATCGCCTTCGGCGAGGTGCAGCCGCTGGGCTCCGCCACCGTCCGCCTCGCCTGCCTGCTGGTTCTGGCGCTCCTCTGGGGCATCGGCAGCTTCTTCGTGCGCACCCGCCGCTCCAGCGAGGACGAGGCGCTGCTCGCCGCACTCCGCCGCCAGGAAGAGGAGGCGGAAGTAGCCCGCGACAAGGGGGATGCCGCCGCCGATGCCGAGTTCGCCGCCTTCCGCGACGCCGGCCGCGCGGTCCTGTCCTTCCTGCGCCGCCGCAGCGGTTTCCGTTTCGTCAGCAGCCGCTATACCCTGCCCTGGTATATCGTGCTCGGCGCCGGCGGCGTCGGCAAATCCAGCGTGCTCAAGGCCAGCGGCATCGCCGCGCCCTACGACACCGATCCCGGCACCGGCCCGGCGCAGTTCCACATCACCGACAAGGCGGTGCTGGTCGAATTCGAGGGCCGCTTCACCGCCGCCAACGACACCGGCGCGGTGCTACTGTGGCAACGGATGCTCGACCAGATCCGCCGCTGGCGTCGCCAGCAGCCGGTCAACGGCATCCTGCTCGTTCTCGACGTGCAATATCTCCTGTCGCGGCCGGAGGAGCATATCGTTGCGGAAGCCGCATCGCTGCGCAAGCGCCTTGACGAAACCATGGCGCGGCTGCGCACGACGGCGCCCGTCTACGTGCTGGTCAACAAGCTCGACATGGTCGTCGGCTTCGAGGAATTCTTCGATTCGCTGACTTCGGAGGAGCGCAATGCCGTGCTCGGCGTGCCGCTCAGTGCGCTCCGCAAGACCGACGGCGCCACCGCCAGGGGCAGCTTCCTGCCGGGCTTTTCGAACATCGTCGAGGGCTTTTCCCGCCACCAGTTCCTGCGCCTGCAGGACGAGCCGGATGAATTGCGCCGGCGGCGGATTTTCGAATTTCCCGGGCAATTCTCGCTGCTGCAATCGCGGCTGACGCCGTTCCTGTGGGAACTTTGCGTCGATCATCGTTTCGCTGATGCGCCGAATGTGCGCGGCGTGTTCTTTTCCAGCACTGTTCAATCCGGCGATTTCCGCGACGGCATGGGCCCGGTTCTTGCCCCGAGCTTCGGCCAGCGCCGCGACGGGCTGTTCCTGCAGCCGGAAACGGGACAGGTCCGCGCCCGGCCGTTCTTCCTCTCCGGCCTGTTCCGCGATGTCATCCTGCCCGAAGCCAATCTCGGCGGCTTGACCCGGCCGGCGCTGGTCGCCAACCGGCTCTACAAGATCGGCGGAAACCTGCTGCTCTTCGCCCTCATCGCCCTCATGATCTCGCTGTGGATCCTGAGTTTCGGCGAGGGCCGCGCCTATACCGCCCGCATCGCGACCGGCGTCGAGGCGGGCCGCGCCAACATTGCCGAGGCCTCGCCCGACGGAAAGATGCCGTCGCAATTCGACCCCGTGCTCGACGTCCTCGACCGGCTGCGCACGCTGGCGGAAGAGGAGCCGCGCCGGGCGACGCTCGGCCTCTATAGCGCCGAGCCGGTCAACAGCGCGGCGCGCGACGCCTATGACAAGGCGCTCGCCAACCTGTTGTTCCCCTTCGTCTGGAGCTATCTTCGCGACGGTCTCGACCACCCCGAGACGCCGGCGGCCCTGCGCTTCCAGCAACTGACAACTGGCTCGTCCACGAGGCCGATCCGGGCACGCAGTTGCGCATCGCCCGCCATTTCGCGGCCCTTGCCGCAGCGCCGCTCACCGTGCCGCCGGCCGATACGGCGTTGGTCAACCGCGCCCGCCGCTGGATTGCGGATTACACGCTGGCGCGGCTCGGCTACGATCTCGTGCAGGCCATGCCCGCCGTCCAGTCACTGCCCGTCTGGCGGCCGGTCGATCACATGGGGCTTACCGGCCCGCAGGCGCTGTCGCGGGTCAGCGGCAACGGTTTCTGGGACGGCGTGCCGGGCCTTTATACGCGCGACGGCCTCATCGGCACGATGCGCGAGGTCGCGGCGACGGCGGCGCGCCATCTCGCCGACGATCTCTGGGTGA
PROTEIN sequence
Length: 706
VRARRAIRRFWTFLKRPSVWLSLGVLILALLVWFVGPAIAFGEVQPLGSATVRLACLLVLALLWGIGSFFVRTRRSSEDEALLAALRRQEEEAEVARDKGDAAADAEFAAFRDAGRAVLSFLRRRSGFRFVSSRYTLPWYIVLGAGGVGKSSVLKASGIAAPYDTDPGTGPAQFHITDKAVLVEFEGRFTAANDTGAVLLWQRMLDQIRRWRRQQPVNGILLVLDVQYLLSRPEEHIVAEAASLRKRLDETMARLRTTAPVYVLVNKLDMVVGFEEFFDSLTSEERNAVLGVPLSALRKTDGATARGSFLPGFSNIVEGFSRHQFLRLQDEPDELRRRRIFEFPGQFSLLQSRLTPFLWELCVDHRFADAPNVRGVFFSSTVQSGDFRDGMGPVLAPSFGQRRDGLFLQPETGQVRARPFFLSGLFRDVILPEANLGGLTRPALVANRLYKIGGNLLLFALIALMISLWILSFGEGRAYTARIATGVEAGRANIAEASPDGKMPSQFDPVLDVLDRLRTLAEEEPRRATLGLYSAEPVNSAARDAYDKALANLLFPFVWSYLRDGLDHPETPAALRFQQLTTGSSTRPIRARSCASPAISRPLPQRRSPCRRPIRRWSTAPAAGLRITRWRGSATISCRPCPPSSHCPSGGRSITWGLPARRRCRGSAATVSGTACRAFIRATASSARCARSRRRRRAISPTISG*