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SCNpilot_cont_500_bf_scaffold_14575_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3939..4661

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump n=1 Tax=Rhizobium sp. AP16 RepID=J2CYC0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 198.0
  • Bit_score: 293
  • Evalue 1.70e-76
Cation/multidrug efflux pump {ECO:0000313|EMBL:EJK82229.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 198.0
  • Bit_score: 293
  • Evalue 2.50e-76
acriflavin resistance (multidrug efflux transporter) protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 196.0
  • Bit_score: 292
  • Evalue 9.40e-77

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAGCGCCTCGACGGAAGGAAAATCCGGGGGATTCACCGCCCTGTTCATCCGCCGCCCGATCCTGGCGCTGGTGTTCAACACGCTGATGGTCGTCGCAGGCCTTGCCGCGTGGTTCGGCATCGAGGTGCGCGAGTTGCCGGATACCGACCAGCCGGTCATCACCGTGCGCACCACGCTGGACGGCGCCGCACCCCAGACCATCGACCAGCAGATCACCCGCATCATCGAGGGCGGCGTCGCCCGGGTCAGCGGGCTGAAATCGATTTCCTCCTCGTCCTCCTTCGGCTCCAGTCGCGTGACGCTGGAATTCACCGACAAGACCGATCTGGCGGTCGCCGCCAGCGATGTGCGCGACGCCATCGGCCGCATCCAGTCGCAACTGCCCGACAATGTCGATGCGCCGCAGATCGTCAAGGCCGATGCCGATTCGCAGCCGGTCATGCGGCTTGCGGTCACCTCCGATACGCTCAGCATGGACGATCTGACGCAACTCGTCGACAAGCAGATCTCCGACCGTCTCGCCGCCGTCGACGGCGTCGCCGACGTCCAGCTCTATGGTGACCAGGAAAAGGTTGCCGGCCGGCTCGATCACGAGCACGACCCAGGATATCGTCGTGCGCGCCACCGCCAACCTCACCAAGCCGCAGGATTTCGAAAACCTCATCATCCAGAACCGGGTGCGGCTCGGCGATGTCGCCAGCGTGATGCTCGGCCCGCGTGA
PROTEIN sequence
Length: 241
MSASTEGKSGGFTALFIRRPILALVFNTLMVVAGLAAWFGIEVRELPDTDQPVITVRTTLDGAAPQTIDQQITRIIEGGVARVSGLKSISSSSSFGSSRVTLEFTDKTDLAVAASDVRDAIGRIQSQLPDNVDAPQIVKADADSQPVMRLAVTSDTLSMDDLTQLVDKQISDRLAAVDGVADVQLYGDQEKVAGRLDHEHDPGYRRARHRQPHQAAGFRKPHHPEPGAARRCRQRDARPA*