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SCNpilot_cont_500_bf_scaffold_16738_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..1153)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate transport transcriptional regulatory protein DctD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXU0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 383.0
  • Bit_score: 660
  • Evalue 8.70e-187
  • rbh
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:EYR83938.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 383.0
  • Bit_score: 660
  • Evalue 1.20e-186
C4-dicarboxylate transport transcriptional regulatory protein DctD similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 379.0
  • Bit_score: 579
  • Evalue 8.00e-163

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGAGCACACCCGTTTTCCTGGTCGACGACGACCGGCAATTGCTGCGCGCGATGGCGCAAACGCTGGAACTTGCGGATTTCGCCGTCACGCCCTTCGCGTCTGCCGCCGAGGCGCTGTCGCAGTTGGACCGCGATTTCGCCGGCGTCGTCGTCTCCGACATCCGCATGCCCGGCATGGACGGGCTTCAGCTCTTTGAGCGCATCCTTGGGCTTGATCCGGAAATTCCCGTCATCCTCGTGACCGGCCATGGGGATATTGCAATGGCCGTCAAAGCCATCCAGGACGGCGTATATGATTTCATCGCCAAGCCGTTTCAATCCGAACGGCTGATTCAATGCGTGCATCGCGCGGCAGAAAAACGCGGCCTTGTCCTCGAAAACCGTCGTCTTCGCGATGTCGCGCGGCAGGCGGAAGACGATTTCCCGCTGATCGGCCAGACTCCCGTCATGGATAGGCTGCGCCAGACACTGCGCCAGATCGCCGATACGGATGTCGATGTGCTCGTAACCGGCGAAACGGGCAGCGGCAAGGAAGTCGTCGCGCGCCTGCTGCATAACTGGAGCCGACGTGCAAAGGGCAATTTCGTGGCGCTTAACTGCGGCGCCCTGCCGGAGCAGGTGATCGAAAGCGAGTTGTTCGGCCACGAACCGGGCGCATTCACCGGCGCGCAGAAAAAGCGCATCGGCCGCATTGAGCATTCCAGCGGGGGCACGCTGTTTCTCGATGAGTTGGAAAGCATGCCGCTCTCGACACAGATCCAGATGTTGCGCGTGCTGGAGTTGCGCGAGGTGACGCCACTGGGAACCAACGAGGTGCGGCCCGTCGATATCCGCATCGTGGCCGCGGCAAAAGTCGATCTCGCCGATCCCGAACAGCGCAAGGCCTTCCGGGAAGACCTCTACTACCGTCTCAACGTCATCTCGCTGACCATCCCGCCGCTGCGCGAGCGGCGGGATGATATTCCACTCCTGTTCAGCTATTTCGCCGAGCGGGCAGCGCGGCGTTTCCAGCGGCCGGCGCCGCCCCTTTCCGCCGATATCCTTCATCATCTGCGCGCGCATGACTGGCCGGGTAATGTCCGCGAACTCTCCCATTTCACCGAACGTGTCGTGCTTGGGATGACGCCCGGCACGGTGGCTGGGGGCTCGTCC
PROTEIN sequence
Length: 384
MSTPVFLVDDDRQLLRAMAQTLELADFAVTPFASAAEALSQLDRDFAGVVVSDIRMPGMDGLQLFERILGLDPEIPVILVTGHGDIAMAVKAIQDGVYDFIAKPFQSERLIQCVHRAAEKRGLVLENRRLRDVARQAEDDFPLIGQTPVMDRLRQTLRQIADTDVDVLVTGETGSGKEVVARLLHNWSRRAKGNFVALNCGALPEQVIESELFGHEPGAFTGAQKKRIGRIEHSSGGTLFLDELESMPLSTQIQMLRVLELREVTPLGTNEVRPVDIRIVAAAKVDLADPEQRKAFREDLYYRLNVISLTIPPLRERRDDIPLLFSYFAERAARRFQRPAPPLSADILHHLRAHDWPGNVRELSHFTERVVLGMTPGTVAGGSS