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SCNpilot_cont_500_bf_scaffold_16008_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1261..2154)

Top 3 Functional Annotations

Value Algorithm Source
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D642_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 296.0
  • Bit_score: 517
  • Evalue 1.20e-143
  • rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR82202.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 296.0
  • Bit_score: 517
  • Evalue 1.70e-143
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 294.0
  • Bit_score: 429
  • Evalue 1.00e-117
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGATGGCCCTTCCTCCCCTGCATGCGTTTCGTGTCTTCGAAAGCGTCGCCCGGCTTGGCAATGTCGGCGCGGCCGCAGCCGAGCTGCATGTGACGCCGGGCGCGGTCAGCCAGCAGATCCGCGCCCTGCAGACGGGGCTCGGGGTCGAGCTGTTCCAGAAACGCGGCCGCCAGCTCGCCCTGACCCGGAGCGGCGCCCAGCTCCAGCGCTCGGTCGCCACCGCCATGGACGCGATCCAGACCGGCGTGCGCCAGGTCGCCGCCGCGCGCCACGACGAGGAGACAAGGCGCAGCCTGCGGATCTCCATGCCCCAGGTCTACGGAACGGCCTGGCTCGCCACGCGTCTCTTCCGATTCATGGACGAGAACCCGAATTTCCAGTTGAACGTCGTGACCTCGAGCTATTTCCAGGGCATTGACTGGCGCAAGACCGATGTCGCCGTCATCTATGGCGTGCCGCCCTGGCCGGGCTTCTGGTGGCATCTGCTGCATGGCATCCGCATGACGCCGGTCTGCAGCCCGCAATTGCTGCGTGGGCCGAAGGCTATCCGCCAGCCTTCCGATCTTGCCTATCACCGCCTGCTGCATGAAGACGACGGTGCGCAATGGCGGCGCTGGCAGGCGCAGGCCGGCATTGCCTGGGGCGGCGAGTCGGATGTCTATTTCGACAGTTTCGGCATCGTCCTCCAGGCCGCTCGTGACGGCTTCGGCGTGGCGCTGAGCGACGAGGTGGTCTCCGCCCGCGATCTCGACGAGGGCAGGCTCGTGCAGCCGTTGCAAATCGGCGTCGCCGCGCTCCACAACTACTATTGCCTGTGCCCTGAGGCCAAGCGCGACAGCGCCGAGATCGATTATTTCATCAACTGGCTGATCGGTGAATCGTCAGGACCGTGA
PROTEIN sequence
Length: 298
MMALPPLHAFRVFESVARLGNVGAAAAELHVTPGAVSQQIRALQTGLGVELFQKRGRQLALTRSGAQLQRSVATAMDAIQTGVRQVAAARHDEETRRSLRISMPQVYGTAWLATRLFRFMDENPNFQLNVVTSSYFQGIDWRKTDVAVIYGVPPWPGFWWHLLHGIRMTPVCSPQLLRGPKAIRQPSDLAYHRLLHEDDGAQWRRWQAQAGIAWGGESDVYFDSFGIVLQAARDGFGVALSDEVVSARDLDEGRLVQPLQIGVAALHNYYCLCPEAKRDSAEIDYFINWLIGESSGP*