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SCNpilot_cont_500_bf_scaffold_17991_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3645..4334)

Top 3 Functional Annotations

Value Algorithm Source
betA1; choline dehydrogenase BetA (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 169.0
  • Bit_score: 174
  • Evalue 4.60e-41
Choline dehydrogenase BetA {ECO:0000313|EMBL:AGU47827.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AGU47827.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 169.0
  • Bit_score: 174
  • Evalue 2.10e-40
Choline dehydrogenase BetA n=1 Tax=Variovorax paradoxus B4 RepID=T1X4J4_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 169.0
  • Bit_score: 174
  • Evalue 1.50e-40

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAGAAACGAACGACTGACGGACGGGCTTCGCCATGCGATGCTCGACAAGCTCGAGGCATCGATGCTGAACGGCGCGATCGGGCGCCGGCGCTTCATGCAATGGTCGCTGGCGCTCGGGGCATCGTTTGCCGCGACGCGGGCGCTGGCCGACCAGCTGGCGGATGCGCGCGCCAATCAGGACGAGCGCGCCAACAGGCTGGCCGATACCTATGAGGTGGTGATCTGCGGCGGCGGCACGTCGGGCTGCGCGCTGGCCGGCCGCCTTGCCGAGGCCGGCGTCAACGTCCTGCTGATCGAAGCCGGCGGCTGGGACACCGCGCCGAGTGTGCTCGATCCGCGCCTGTGGTTCACCAATCTCGGCACGCCGCTCGACTGGGGCGATATCTCGGTCCCGACCAGAAGCGTCAACGATCGCGCCGTCGCCTCGCACATGGCCAAGGTTCTCGGCGGCGGAAGTTCGATCAACGCCACCATATGGGTTCGCGGCCATCGCAACAATTACGAGGACTNNNNNNNNNNNNNNNNNNNNCGAGATATCGCGGCAAGGGCGGCAAGATCTGGGTGGAGTCCTCGCAGGATCCGCTGCCGGTGGCGCCCGCCATGCTGGAGGCGGTCAAGAGCCTCGGAATGCCGGTCTATGCCGATCTCAACGGCGCCCGCGAGGAGAGCGCCGGGGGCTTTGCGCTGA
PROTEIN sequence
Length: 230
MRNERLTDGLRHAMLDKLEASMLNGAIGRRRFMQWSLALGASFAATRALADQLADARANQDERANRLADTYEVVICGGGTSGCALAGRLAEAGVNVLLIEAGGWDTAPSVLDPRLWFTNLGTPLDWGDISVPTRSVNDRAVASHMAKVLGGGSSINATIWVRGHRNNYEDXXXXXXXRDIAARAARSGWSPRRIRCRWRPPCWRRSRASECRSMPISTAPARRAPGALR*