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SCNpilot_cont_500_bf_scaffold_17516_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(812..1465)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=2 Tax=Agrobacterium RepID=F0L7I3_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 213.0
  • Bit_score: 321
  • Evalue 9.20e-85
  • rbh
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 213.0
  • Bit_score: 321
  • Evalue 2.90e-85
  • rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KGE83961.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 213.0
  • Bit_score: 321
  • Evalue 1.30e-84

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGTCGTCCGATCCGCTGACAGCGCCGGAATTCTCGCCGCGCCAGAACGCTGTTCTGGGCCAGGCGTTGCGGCTGCTCGTCGATGGCGGCGAGAAGGCGCTGACGACGGCGGGCGTGGCGCGTGCCGCCAACTGCTCCAAGGAAAGCCTCTACAAATGGTTCGGCGATCGCGACGGCCTGATCGCGGCGATGATCGCCTTCCAGGCCAGCAAGGTGCGCACTTTCGAGCGTGACGGCGAGCGGCTGAATGTCGCAAGCCTGCGTGAGCATCTGGTTATGTTCGCCAAGGATCTGCTCGAAGTCCTCTCCGGCGACGTGTCGCTGGCGCTCAATCGTCTCGCGGTCAGCCAATCGAGCCGCGACGGCTCCAAGCTCGGCGAATTGCTGCTGGAGCATGGCCGCCGCCAGATCGATCGCCGCGCCCGTGCGCTGATCGATGCCGGCCGCCGCGCCGGGCTCTTGACCTTCGACGATGGGGAAGAAGCCTATCGCACCCTTTACGGGCTGATCGTTTCGGATATGCATGTCCGCATGCTGCTCGGGGAGCGCCCGCAGGGCGATTTCACCCAGCGCGCGGAAAAGGCTGTGCGCGCCTTCCTGACGCTGCACGGCACGGCAAAAACTTTGGCGGAGGCGGGTCTAGCGCCCGTCTGA
PROTEIN sequence
Length: 218
VSSDPLTAPEFSPRQNAVLGQALRLLVDGGEKALTTAGVARAANCSKESLYKWFGDRDGLIAAMIAFQASKVRTFERDGERLNVASLREHLVMFAKDLLEVLSGDVSLALNRLAVSQSSRDGSKLGELLLEHGRRQIDRRARALIDAGRRAGLLTFDDGEEAYRTLYGLIVSDMHVRMLLGERPQGDFTQRAEKAVRAFLTLHGTAKTLAEAGLAPV*