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SCNpilot_cont_500_bf_scaffold_17790_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..415)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C694_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 138.0
  • Bit_score: 268
  • Evalue 3.40e-69
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EYR77401.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 138.0
  • Bit_score: 268
  • Evalue 4.80e-69
ywbI; LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 135.0
  • Bit_score: 151
  • Evalue 1.90e-34

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGGCACGCCAAAGACGCCGTTTCGTCTGGGAAATCGACTGGAACCTGCTGAGAACCTTCATGGTCATCGTGCAGGAGCGCGGGCTGACGGCGGCGGGCGAAAAATTGTCGTTGAAACAGCCGACCGTCAGCAATGCGCTGAAGCGGCTGGAAATCCATATGGATTGCCGGCTCATCGAGCGCAACGCGTCGCATTTCGCGGTCACGCCGGCCGGGCAGCGGCTGTTCAACGAATGCGTCGCGCTGTTCGAGATCGTCTCCGGCCTGCCACAGCACATGGAGGAGCAGCCCGGCGATCTCACCGGCCATATCGAGATCGCGCTTGCCAGCCACGTCGTCTGCCCGTTCCTCGACGAGGTGCTGGCCGGTTTCCACACGAATTTTCCGCAGGTGACGCTGTCGCTGTCCGTCGCC
PROTEIN sequence
Length: 138
MARQRRRFVWEIDWNLLRTFMVIVQERGLTAAGEKLSLKQPTVSNALKRLEIHMDCRLIERNASHFAVTPAGQRLFNECVALFEIVSGLPQHMEEQPGDLTGHIEIALASHVVCPFLDEVLAGFHTNFPQVTLSLSVA