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SCNpilot_cont_500_bf_scaffold_18299_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3..272)

Top 3 Functional Annotations

Value Algorithm Source
Multi-sensor hybrid histidine kinase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FD14_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 72.0
  • Bit_score: 64
  • Evalue 6.40e-08
Signal transduction histidine kinase {ECO:0000313|EMBL:EYR78522.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 83.0
  • Bit_score: 102
  • Evalue 3.90e-19
two component sensor kinase/response regulator hybrid similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 70.0
  • Bit_score: 64
  • Evalue 2.60e-08

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GTGATCAAGAAGGCCCAGCACAATGGCGACGTGATCCGCCGCGTCAGCAAGACCACCATGATCTTGCAGGTGTTTTCCGTCGCCTTGCTGTTGGGCCTCGCCTATCTCGCCGTCGACGTCTTCCGCCGCTACTCGACCCTTCAGGACGGTATCCGCGAGAACGCCCTGTGGTCCGTCTACCAGCTCGACCGGGAGGCGCGCCGGCTGCACGAGCAATTGCATCTTTCCATCGTCGACGGGTCCCATGCCGGCGCCGGCGCCAAGTCGCTG
PROTEIN sequence
Length: 90
VIKKAQHNGDVIRRVSKTTMILQVFSVALLLGLAYLAVDVFRRYSTLQDGIRENALWSVYQLDREARRLHEQLHLSIVDGSHAGAGAKSL