ggKbase home page

SCNpilot_cont_500_bf_scaffold_26596_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1..528

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein His/Glu/Gln/Arg/opine family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBI2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 175.0
  • Bit_score: 324
  • Evalue 8.80e-86
Amine acid ABC transporter, permease protein His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EYR80310.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 175.0
  • Bit_score: 324
  • Evalue 1.20e-85
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 175.0
  • Bit_score: 309
  • Evalue 7.10e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
CGGCTGTCGGGCAATCGCATCCTCGGCGGTCTGGCGACCGGCTGGGTCGAGATCGCGCGCAACACGCCGGCCCTGTTCCAGATTTATATGGCCCATTTCGGCCTTGGCAGTTTCGGCATCCACCTCAGTCCCTTCACGTCGCTGCTGGTCGGTATCGCCTTCAACAATGCCGGTTATCTCGCGGAAAACTTTCGTGGAGCGCTGAAAGCGATCCCGGAAACCCAGACCCGCGCCGCCCGCTCGCTCGGCATGAGCCCGATGCAGGCCTTCCGTTATGTCGTCATGCCGCAGATGCTGCGCATCGCTTTCCTGCCCGCCACCAACCAGATGGTCTGGGCGATCCTGATGACCTCGCTTGGCGTCACCGTCGGCATGAATACCGATCTCGCCGGCGTAACCCAGGCACTGAACGCGGTGTCCTTCCGCACCTTCGAATTCTTCGCGCTCGCTGCGGTGATCTATTACGTCATCGCCAAGGTCGTCACCCTGGCCGCCCGCTTGTTTGCGGCGCGTATGTTCCGTTACTGA
PROTEIN sequence
Length: 176
RLSGNRILGGLATGWVEIARNTPALFQIYMAHFGLGSFGIHLSPFTSLLVGIAFNNAGYLAENFRGALKAIPETQTRAARSLGMSPMQAFRYVVMPQMLRIAFLPATNQMVWAILMTSLGVTVGMNTDLAGVTQALNAVSFRTFEFFALAAVIYYVIAKVVTLAARLFAARMFRY*