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SCNpilot_cont_500_bf_scaffold_28174_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(581..1462)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HQ98_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 292.0
  • Bit_score: 330
  • Evalue 1.60e-87
  • rbh
Putative RuBisCO transcriptional regulator {ECO:0000313|EMBL:CDM59056.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 292.0
  • Bit_score: 334
  • Evalue 1.50e-88
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 290.0
  • Bit_score: 309
  • Evalue 1.20e-81
  • rbh

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGACGCTGGAGCAGCTCCGGATTTTCACCGCCGTCGCCGCCTGCCAGCACGTCACGCGGGCAGCGGAACGCCTGAACATGACGCAATCGGCGGTGAGCGCGGCCATTGCGGCGCTGGAAGTCCGTCACGGCGTCAAGCTTTTCGACCGCATCGGCCGCTCCATCCTGCTCAACGGGGCCGGCCAGCAATTTCTCGAGGAGGCGCAAAAAGTGCTGGCGGCGGCGCAAGCGGCGGAGGCGGTGCTGAACGATCTTTCCGGCCTCGGGCGTGGCGCGCTGACGATCATGGCGAGCCAGACGGTTGGCGCCTACTGGCTTCCGGGATGCCTTGCGGCTTTCCACCAGGGGTTTCCCGGCATCCGCCTGCAAGTGTCGCTCGGCAATACCACGGAGGTGACGCAGGCCGTTCTGGAAGGCCGCGCCGAACTCGGCCTCACCGAAGGCACGAACGCGCCCCGCGGCCTCCTTTCGCGACAGATCGCCGAGGACGAGATGATCGTCGTCGTCTCGCCCTTCCATCCCTGGGCGCGGCCGGGCGCGGTCGTCGACGATCTTCGCGACAGCGCCTGGATCCTGCGCGAGGCGGGATCGGGCACGCGACAGGCGTTTGTGCGGCTGCTCGAGGCCGCCGGGCTATCGCTCGATGCCATCGATATCGAGCTGGAACTGCCCGGAAACGAGGCGGTGATCGGTGCCGTTGAGAATGGATTGACCGCCACTCTGGTGTCGCGCAGCGTGGTCGCGGCGCCGCTGCAATACGGCCGCCTGGCGCTTGCGCCAGTCGCTCCGCTGCCGCGTCCCTATTTCCTGCTGCGGCACCCGGAGCGTTATCGCAGCAAATCGGCGGAAGCCTTTGAACGACTCCTTGAAAATAAGGCATGA
PROTEIN sequence
Length: 294
MTLEQLRIFTAVAACQHVTRAAERLNMTQSAVSAAIAALEVRHGVKLFDRIGRSILLNGAGQQFLEEAQKVLAAAQAAEAVLNDLSGLGRGALTIMASQTVGAYWLPGCLAAFHQGFPGIRLQVSLGNTTEVTQAVLEGRAELGLTEGTNAPRGLLSRQIAEDEMIVVVSPFHPWARPGAVVDDLRDSAWILREAGSGTRQAFVRLLEAAGLSLDAIDIELELPGNEAVIGAVENGLTATLVSRSVVAAPLQYGRLALAPVAPLPRPYFLLRHPERYRSKSAEAFERLLENKA*