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SCNpilot_cont_500_bf_scaffold_27838_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 666..2030

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhizobium sp. CF080 RepID=J2K628_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 454.0
  • Bit_score: 830
  • Evalue 7.50e-238
  • rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EUB95794.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 454.0
  • Bit_score: 830
  • Evalue 1.10e-237
ntrX; two-component response regulator nitrogen regulation protein; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 454.0
  • Bit_score: 826
  • Evalue 4.40e-237

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGGCGTCTGATATTCTGGTCGTCGACGACGAAGAAGACATCCGCGAGATCGTATCCGGCATCCTCTCGGATGAAGGACACGAGACGCGCACGGCCTATGACAGCGACAGCGCGCTGGCCGCGATTTCCGACCGCGTGCCGCGCCTGGTCTTCCTCGACATCTGGATGCAAGGCTCGAAGCTCGATGGATTGTCGCTGCTCGACGAGATCAAGAGCCGCCATCCCGATCTTCCGGTGGTGATGATTTCCGGCCACGGCAATATCGAGACCGCCGTCTCCGCCATCCGCCGCGGCGCCTTCGATTTCATCGAAAAGCCGTTCAAGGCCGACCGTCTGATTCTGATCGCCGAGCGCGCGCTGGAAACCTCCAAGCTGAAGCGCGAAGTGACGGAGCTGAAGAAGCGCGCCGGCGACGCCGTCGAGCTGATCGGCACCTCGATTGCCGTCTCGCAGCTTCGCCAGACGGTCGAGAAGGTCTCGCCGACCAACAGCCGTGTGATGATTCTCGGCCCCTCCGGCTCCGGCAAGGAGCTGGTGGCGCGCATGATCCACAAGAAGTCGTCGCGTGCGAGTGGTCCCTTCGTGGCGCTCAATGCGGCGGCGATCACCCCGGATCGCATGGAGATCGCCCTGTTCGGCACCGAGGGCGGCCCCGGCCAGGCGCGCAAGATCGGCGCGCTGGAAGAGGCCCATCGCGGCATCCTCTATCTCGATGAAGTCGGCGAAATGCCGCGCGAGACGCAGAACAAGATCCTGCGCGTGCTGGTCGACCAGCAGTTCGAGCGCGTCGGCGGCTCCAAGCGGGTGAAGGTGGATGTGCGCATCATCTCGTCTACCGCCTATAATCTCGAGAGCCATATCGCCGAGGGCGCCTTCCGCGAGGATCTGTATCATCGCCTCGCCGTCGTGCCGGTGCGCGTGCCGGCGCTGGCCGAGCGGCGCGAGGACATCCCGTTCCTCGTCGACATGTTCATGCGTCAGATTTCCGAGCAGGCCGGTATTCGCCAGCGCCGCATCGGCGACGACGCCATGGCGGTGCTGCAGGCGCATGACTGGCCGGGCAATATCCGCCAGCTTCGCAACAACATCGAGCGGCTGATGATTCTCGCCCGTTCCGATGGCCCGGATTCGCCGATTACCGCCGACATGCTGCCGACCGATCTGGGCGACATGCTGCCGAAAACCACCTCGGGCGGCGACTATCACATCATGACCTTGCCGTTGCGCGAAGCCCGCGAGATGTTCGAGCGCGATTACCTGATCGCCCAGATCAACCGCTTCGGCGGCAACATTTCGCGCACGGCGGAATTCGTCGGCATGGAGCGCTCGGCGCTGCACCGTAAGCTGAAATCGCTCGGCGTGTGA
PROTEIN sequence
Length: 455
MASDILVVDDEEDIREIVSGILSDEGHETRTAYDSDSALAAISDRVPRLVFLDIWMQGSKLDGLSLLDEIKSRHPDLPVVMISGHGNIETAVSAIRRGAFDFIEKPFKADRLILIAERALETSKLKREVTELKKRAGDAVELIGTSIAVSQLRQTVEKVSPTNSRVMILGPSGSGKELVARMIHKKSSRASGPFVALNAAAITPDRMEIALFGTEGGPGQARKIGALEEAHRGILYLDEVGEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSTAYNLESHIAEGAFREDLYHRLAVVPVRVPALAERREDIPFLVDMFMRQISEQAGIRQRRIGDDAMAVLQAHDWPGNIRQLRNNIERLMILARSDGPDSPITADMLPTDLGDMLPKTTSGGDYHIMTLPLREAREMFERDYLIAQINRFGGNISRTAEFVGMERSALHRKLKSLGV*